Pairwise Alignments

Query, 1149 a.a., helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 914 a.a., SNF2-related:Helicase, C-terminal:SWIM Zn-finger from Pseudomonas syringae pv. syringae B728a

 Score =  170 bits (431), Expect = 4e-46
 Identities = 160/531 (30%), Positives = 243/531 (45%), Gaps = 102/531 (19%)

Query: 462 PHQDIGVRWILGVEQKSLSDSKVSGALLADDMGLGKTFMALSAIEHIYQRQQISGETKKP 521
           P+Q  G+ W+     +SL + +V G +LADDMGLGKT   L+   H+   +Q +G   +P
Sbjct: 442 PYQLEGLSWM-----QSLRELEVGG-VLADDMGLGKTLQTLA---HLLMEKQ-AGRLDRP 491

Query: 522 ALIVAPLSLLENWKDEVDKTFKHSPFKDVVILQSSAELNEYRMGGVEIRGQSASDDCLEP 581
           AL V P SL+ NW DE +     +P   V+ L        Y     +  G     D +  
Sbjct: 492 ALAVMPTSLIPNWLDESEH---FTPDLKVLAL--------YGANRHQDAGNLQDYDLILT 540

Query: 582 KYSLKVGKYFGPSRLDLPERLVITTYQTLRDYQFSMCLIDWGIVVFDEAQNIKNPNALQT 641
            Y+L            LP  L +   Q               +++ DEAQ IKNPN+   
Sbjct: 541 TYAL------------LPRDLELLEKQPFH------------VLILDEAQYIKNPNSKAA 576

Query: 642 RAAKGLKADFKLVATGTPVENSLADFWCLMDTACPGHLGSYQEFRARYISPILKAAG-DE 700
           +AA+ L A  +L  +GTP+EN L + W L     PG LG+ +EF + Y + I K    D 
Sbjct: 577 QAARNLNARQRLCLSGTPLENHLGELWSLFHFLMPGWLGNSKEFNSNYRTAIEKHGNQDR 636

Query: 701 VEEIRARLGRELRIAVGALMLRRIKEDNLKGLPLKHMYAGGEFENWKYLEELKSTMVGYQ 760
           +  + AR        +   +LRR KE     LP K      E  +W  L +        Q
Sbjct: 637 LHHLNAR--------IKPFLLRRTKEQVATELPPK-----TEIIHWVDLNDA-------Q 676

Query: 761 RDVYEG---AISHQLENEESH---------ALTTLMRLRDSSLHPRLSDGGRLDIPKNAK 808
           RDVYE    A+  ++ +E +           L  L++LR      RL +    D+P N+K
Sbjct: 677 RDVYETVRLAMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVN---QDMPVNSK 733

Query: 809 SARALYGESGKLVSLLETLDRVRSKQEKCIIFAVNKRLQSFLSVTLGQIYNLGPLSVING 868
                 G SGKL SL+E  + + ++  K ++F+    + S +   L Q           G
Sbjct: 734 Q-----GTSGKLNSLMEMFEELLAEGRKILLFSQFTSMLSLIEEELKQ----------RG 778

Query: 869 DAKAVAKRKSVPTRKSMISDFEAKEGFNLIVMSPVAAGVGLTVVGANHVVHLERYWNPAK 928
            A A+    S   R++ I DF++ +   + ++S  A G GL +  A+ V+H + +WNPA 
Sbjct: 779 IAYALL-TGSTRDRRTPIHDFQSGK-LPIFLISLKAGGTGLNLTAADTVIHYDPWWNPAA 836

Query: 929 EAQATDRVYRIGQEKEVHIYIPLLHHPEFESFDVNLHRLLTQKTLLKDAVV 979
           E QATDR YRIGQ+K V +Y  +       + +  + RL  +K+ L   V+
Sbjct: 837 ENQATDRAYRIGQDKPVFVYKMIAR----GTVEEKIQRLQREKSALASGVL 883