Pairwise Alignments

Query, 1149 a.a., helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 1170 a.a., helicase from Sinorhizobium meliloti 1021

 Score = 48.9 bits (115), Expect = 2e-09
 Identities = 82/326 (25%), Positives = 116/326 (35%), Gaps = 92/326 (28%)

Query: 460 PFPHQDIGVRWILGVEQKSLSDSKVSGALLADDMGLGKTFMALSAIEHIYQRQQISGETK 519
           P PHQ   V        +SL   +    +LADD G GKT MA      +Y R+ I     
Sbjct: 104 PLPHQITAV-------YESLLPRQPLRFVLADDPGAGKTIMA-----GLYIRELIMRADS 151

Query: 520 KPALIVAPLSLLENWKDEVDKTFKHSPFKDVVILQSSAELNEYRMGGVEIRGQSASDDCL 579
              LIVAP SL+E W+DE+ + F                       G+E    S+  +  
Sbjct: 152 HRILIVAPGSLVEQWRDELHEKF-----------------------GLEFYVYSSLLEQT 188

Query: 580 EPKYSLKVGKYFGPSRLDLPERLVITTYQTLR--DYQFSMCLIDWGIVVFDEAQNI---- 633
            P          G    D P RL++   Q  R  + Q  +C   W + VFDEA  +    
Sbjct: 189 SPS---------GNPFEDYP-RLIVRLDQISRNEELQDKLCAPGWDLAVFDEAHKLSAHY 238

Query: 634 ---KNPNALQTRAAKGLKADFK--LVATGTPVENSLADFWCLMDTACPGHLGSYQEFRAR 688
              K     + R A+ L A  +  L+ T TP      DF   +          Y +FR  
Sbjct: 239 FGSKLEKTGRFRFAEKLGAHVRHLLLMTATPHNGKEEDFQLFLSLLDSDRF--YGKFR-- 294

Query: 689 YISPILKAAGDEVEEIRARLGRELRIAVGALMLRRIKEDNLKGLPLKHMYAGGEFENWKY 748
                     D V ++ A            LM R +KE+ +K            F+    
Sbjct: 295 ----------DGVHKVDA----------SDLMRRMVKEELVK------------FDGTPL 322

Query: 749 LEELKSTMVGYQRDVYEGAISHQLEN 774
             E K+  V Y+    E A+   + N
Sbjct: 323 FPERKAYTVNYELSPIEAALYEAVTN 348



 Score = 44.3 bits (103), Expect = 6e-08
 Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 9/117 (7%)

Query: 833 KQEKCIIFAVNKRLQSFLSVTL-GQIYNLGPLSVINGDAKAVAKRKSVPTRKSMISDFEA 891
           +Q K IIF+ ++   ++L   + G + N   +  I+G      +R+    +    SD + 
Sbjct: 498 RQRKIIIFSEHRDTLNYLQARIAGVLGNPDAIVTIHGGTHRDERRR---LQALFRSDLDV 554

Query: 892 KEGFNLIVMSPVAAGVGLTVVGANHVVHLERYWNPAKEAQATDRVYRIGQEKEVHIY 948
           +     ++++  AAG G+ +  AN +V+ +  WNP +  Q   R++RIGQ +  H++
Sbjct: 555 R-----VLVATDAAGEGVNLQNANLMVNYDLPWNPNRLEQRFGRIHRIGQTEVCHLW 606