Pairwise Alignments

Query, 1149 a.a., helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 1209 a.a., SNF2 helicase-related protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  162 bits (411), Expect = 1e-43
 Identities = 149/498 (29%), Positives = 217/498 (43%), Gaps = 99/498 (19%)

Query: 463  HQDIGVRWILGVEQKSLSDSKVSGALLADDMGLGKTFMALSAIEHIYQRQQISGETKKPA 522
            +Q+ G+ W+  +   +L      G +LADDMGLGKT   L+   HI   ++ SG    P 
Sbjct: 749  YQNEGLDWLQFLRANNL------GGILADDMGLGKTLQTLA---HILVEKE-SGRLNDPV 798

Query: 523  LIVAPLSLLENWKDEVDKTFKHSPFKDVVILQSSAELNEYRMGGVEIRGQSASDDCLEPK 582
            LIVAP S+L  W+ E  +    +P   +V+L        +         Q A  D     
Sbjct: 799  LIVAPTSVLGAWRREAAQ---FAPGLRLVVLHGPERAAGF--------SQMADQD----- 842

Query: 583  YSLKVGKYFGPSRLDLPERLVITTYQTLRDYQFSMCLIDWGIVVFDEAQNIKNPNALQTR 642
                               +V+T+Y  +R     +    W ++V DEAQ I+NP  +Q +
Sbjct: 843  -------------------VVVTSYALVRHDLEVLKAQPWHMLVLDEAQTIRNPQTVQYK 883

Query: 643  AAKGLKADFKLVATGTPVENSLADFWCLMDTACPGHLGSYQEFRARYISPILKAAGDEVE 702
            A   LKA  +L  TGTP+EN L D W LMD   PG LG    FR  +  PI K  GD   
Sbjct: 884  AVAALKARHRLFLTGTPLENHLGDLWALMDLLMPGLLGDGATFRRVFRGPIEKR-GDGPR 942

Query: 703  EIRARLGRELRIAVGALMLRRIKEDNLKGLPLKHMYAGGEFENWKYLEELKSTMVGYQRD 762
                   R L + V   +LRR K++    LP K      E  +   LE       G QRD
Sbjct: 943  R------RALAVRVRPFILRRTKDEVATDLPAKT-----EMIDMVELE-------GGQRD 984

Query: 763  VYEGA--ISHQLENE----------ESHALTTLMRLRDSSLHPRLSDGGRLDIPKNAKSA 810
            +YE     +H+   E            H L  L RLR     PRL  GG    P +AK  
Sbjct: 985  LYEAVRLAAHKAIREVLAEKGLARGRIHILAALTRLRQVCCDPRLVKGGPRKPPPSAKLD 1044

Query: 811  RALYGESGKLVSLLETLDRVRSKQEKCIIFAVNKRLQSFLSVTLGQIYNLGPLSVINGDA 870
            R           L E L  +  +  + ++F+    + + +   L       P   + G+ 
Sbjct: 1045 R-----------LEEMLRDLVDEGRRTLVFSAFPSMLALVEERLAAASI--PWVSLTGET 1091

Query: 871  KAVAKRKSVPTRKSMISDFEAKEGFNLIVMSPVAAGVGLTVVGANHVVHLERYWNPAKEA 930
            +          R + ++ F++     + ++S  A G GLT+  A+ V+H + +WNPA EA
Sbjct: 1092 R---------DRDTPVTRFQSG-AVPVFLISLKAGGTGLTLTAADTVIHYDPWWNPAVEA 1141

Query: 931  QATDRVYRIGQEKEVHIY 948
            QATDR +RIGQ+K V ++
Sbjct: 1142 QATDRAHRIGQDKPVFVH 1159