Pairwise Alignments

Query, 1149 a.a., helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 963 a.a., helicase SNF2 from Pedobacter sp. GW460-11-11-14-LB5

 Score =  169 bits (427), Expect = 1e-45
 Identities = 144/525 (27%), Positives = 239/525 (45%), Gaps = 85/525 (16%)

Query: 463 HQDIGVRWILGVEQKSLSDSKVSGALLADDMGLGKTFMALSAIEHIYQRQQISGETKKPA 522
           +Q  G  W   + + +       G  LADDMGLGKT   L+ ++ + +  Q+  ET+  +
Sbjct: 504 YQKAGYNWFSFLREYNF------GGCLADDMGLGKTIQTLAMLQKVKEDDQLL-ETQTTS 556

Query: 523 LIVAPLSLLENWKDEVDKTFKHSPFKDVVILQSSAELNEYRMGGVEIRGQSASDDCLEPK 582
           LI+ P SL+ NW  E  K    +P K  ++  +    N+              D      
Sbjct: 557 LIIMPTSLIYNWLTEAKK---FTP-KLKILAHTGTNRNK--------------DVANFAN 598

Query: 583 YSLKVGKYFGPSRLDLPERLVITTYQTLRDYQFSMCLIDWGIVVFDEAQNIKNPNALQTR 642
           Y + +  Y G +R+D+ E         L+++ F+        ++ DE+QNIKNP +   +
Sbjct: 599 YDIIITTY-GVTRVDVDE---------LKNFYFNY-------IILDESQNIKNPASKSFK 641

Query: 643 AAKGLKADFKLVATGTPVENSLADFWCLMDTACPGHLGSYQEFRARYISPILKAAGDEVE 702
           A + LK+  KL+ +GTPVENS++D W  +    PG LG+   F   Y+  I K   +E  
Sbjct: 642 AVRSLKSKHKLILSGTPVENSVSDLWSQLTFLNPGLLGTQAFFYEEYVQAIEKKKDEE-- 699

Query: 703 EIRARLGRELRIAVGALMLRRIKEDNLKGLPLKH---MYAGGEFENWKYLEELKSTMVGY 759
                  R+L+  +   +LRR KE     LP K    +Y     +   Y E+ KS    Y
Sbjct: 700 -----KARKLQSIIKPFVLRRTKEQVAAELPPKTEQVIYCDMSEDQAAYYEKTKS---AY 751

Query: 760 QRDVYEGAISHQLENEESHALTTLMRLRDSSLHPRLSDGGRLDIPKNAKSARALYGESGK 819
           + D+ +         ++   L  L  LR  + HP + DG             A   +SGK
Sbjct: 752 RNDLLQSMDDGTFAQKQVQLLQGLTALRQLANHPIMIDG-------------AYVSDSGK 798

Query: 820 LVSLLETLDRVRSKQEKCIIFA-VNKRLQSFLSVTLGQIYNLGPLSVINGDAKAVAKRKS 878
             +++ TLD V     K ++F+   K L  F      +     P + ++G  +       
Sbjct: 799 FENVIHTLDNVLKGGHKVLVFSQFVKHLDIFKKHFEAEHI---PFAYLDGATR------- 848

Query: 879 VPTRKSMISDFEAKEGFNLIVMSPVAAGVGLTVVGANHVVHLERYWNPAKEAQATDRVYR 938
              R  ++S+F+      + ++S  A GVGL +  A++V  L+ +WNPA E QA DR +R
Sbjct: 849 --NRGEIVSEFQQNTELKVFLISIKAGGVGLNLTQADYVFILDPWWNPAVEQQAIDRTHR 906

Query: 939 IGQEKEVHIYIPLLHHPEFESFDVNLHRLLTQKTLLKDAVVTPED 983
           IGQ+K+V IY  +      ++ +  +  L  +K  L ++++T E+
Sbjct: 907 IGQDKKVFIYKFIAK----DTVEEKILALQNRKKSLANSLITTEE 947