Pairwise Alignments

Query, 1149 a.a., helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 1128 a.a., DNA helicase from Pedobacter sp. GW460-11-11-14-LB5

 Score =  147 bits (370), Expect = 6e-39
 Identities = 144/526 (27%), Positives = 242/526 (46%), Gaps = 96/526 (18%)

Query: 463  HQDIGVRWILGVEQKSLSDSKVSGALLADDMGLGKTFMALSAIEHIYQRQQISGETKKPA 522
            +Q  G+ W+      +  D    G+ LADDMGLGKT   L+ I  + QR+++   T    
Sbjct: 673  YQKDGLNWL------NFLDDFNFGSCLADDMGLGKTIQVLAFI--LSQREKVKYNTN--- 721

Query: 523  LIVAPLSLLENWKDEVDKTFKHSPFKDVVILQSSAELNEYRMGGVEIRGQSASDDCLEPK 582
            L+V P SL+ NWK EVDK       K +               G   +     DD     
Sbjct: 722  LVVVPASLIFNWKAEVDKFAPSIKVKTIY-------------AGERTKTTDTFDD----- 763

Query: 583  YSLKVGKYFGPSRLDLPERLVITTYQTLRDYQFSMCLIDWGIVVFDEAQNIKNPNALQTR 642
            Y + +  Y            +++  + L+DY+F+        +  DE+Q IKNP++ + +
Sbjct: 764  YEIILTSY----------GTLLSDIRFLKDYRFNY-------IFLDESQLIKNPDSQRYK 806

Query: 643  AAKGLKADFKLVATGTPVENSLADFWCLMDTACPGHLGSYQEFRARYISPILKAAGDEVE 702
            A + L++  K+  TGTP+EN+  D +  +  ACPG  GS Q+F   Y +PI     D+ +
Sbjct: 807  AVRMLQSRNKVTMTGTPIENNTFDLYGQLSFACPGLFGSKQQFADLYSTPI-----DQFK 861

Query: 703  EIRARLGRELRIAVGALMLRRIKEDNLKGLPLKH---MYAGGEFENWKYLE----ELKST 755
            +  +R   EL+  +   +LRR KE   K LP K    +Y     E  +  E    E++  
Sbjct: 862  D--SRRAEELQQKIRPFILRRTKEQVAKELPDKTEIVLYCEMGTEQREVYEANKKEIQDF 919

Query: 756  MVGYQRDVYEGAISHQLENEESHALTTLMRLRDSSLHPRLSDGGRLDIPKNAKSARALYG 815
            ++G Q D    +  H L+     ++TTL ++ +S+    L+DG            ++   
Sbjct: 920  ILGKQEDELPKSSMHVLK-----SITTLRQICNSA--ALLADG------------KSYLQ 960

Query: 816  ESGKLVSLLETLDRVRSKQEKCIIFAVNKRLQSFLSVTLGQIYNLG-PLSVINGDAKAVA 874
             S K+  L+E ++  ++   K ++F+   +  + L +   Q+ + G     + G  +   
Sbjct: 961  ASSKIDVLMEQIES-KAGNHKILVFS---QFVTMLDLIKKQLESRGIKYEYLTGQTR--- 1013

Query: 875  KRKSVPTRKSMISDFEAKEGFNLIVMSPVAAGVGLTVVGANHVVHLERYWNPAKEAQATD 934
                   R  ++S F+      + ++S  A G GL +  A++V  ++ +WNPA E QA D
Sbjct: 1014 ------KRAEVVSSFQQNADIPVFLISLKAGGTGLNLTEADYVYLVDPWWNPAVENQAID 1067

Query: 935  RVYRIGQEKEVHIYIPLLHHPEFESFDVNLHRLLTQKTLLKDAVVT 980
            R YRIGQ K V + + L+     E   + L    T+K L+KD + T
Sbjct: 1068 RAYRIGQHKNV-MAVRLICPDTIEEKIMKLQ--ATKKDLVKDLIQT 1110