Pairwise Alignments

Query, 1149 a.a., helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 1013 a.a., Probable helicase HelZ from Mycobacterium tuberculosis H37Rv

 Score =  177 bits (448), Expect = 5e-48
 Identities = 152/532 (28%), Positives = 233/532 (43%), Gaps = 93/532 (17%)

Query: 462 PHQDIGVRWILGVEQKSLSDSKVSGALLADDMGLGKT--FMALSAIEHIYQRQQISGETK 519
           P+Q  G+ W+  +    L      G+ LADDMGLGKT   +AL  +E + QR Q  G   
Sbjct: 535 PYQQRGLAWLAFLSSLGL------GSCLADDMGLGKTVQLLALETLESV-QRHQDRG--V 585

Query: 520 KPALIVAPLSLLENWKDEVDKTFKHSPFKDVVILQSSAELNEY-RMGGVEIRGQSASDDC 578
            P L++ P+SL+ NW  E                + +  L  Y   GG  + G++  D  
Sbjct: 586 GPTLLLCPMSLVGNWPQEA--------------ARFAPNLRVYAHHGGARLHGEALRDHL 631

Query: 579 LEPKYSLKVGKYFGPSRLDLPERLVITTYQTLRDYQFSMCLIDWGIVVFDEAQNIKNPNA 638
                           R D    LV++TY T       +   +W  VV DEAQ +KN  +
Sbjct: 632 ---------------ERTD----LVVSTYTTATRDIDELAEYEWNRVVLDEAQAVKNSLS 672

Query: 639 LQTRAAKGLKADFKLVATGTPVENSLADFWCLMDTACPGHLGSYQEFRARYISPILKAAG 698
              +A + L+A  ++  TGTP+EN LA+ W +MD   PG LGS + FR RY  PI +   
Sbjct: 673 RAAKAVRRLRAAHRVALTGTPMENRLAELWSIMDFLNPGLLGSSERFRTRYAIPIERHGH 732

Query: 699 DEVEEIRARLGRELRIAVGALMLRRIKEDN--LKGLPLKHMYAGGEFENWKYLEELKSTM 756
            E  E        LR +    +LRR+K D   +  LP K        E  +Y +     +
Sbjct: 733 TEPAE-------RLRASTRPYILRRLKTDPAIIDDLPEK-------IEIKQYCQ-----L 773

Query: 757 VGYQRDVYEGAISHQLENEES--------HALTTLMRLRDSSLHPRLSDGGRLDIPKNAK 808
              Q  +Y+  ++  +E  E+        + L  + +L+    HP      R  + +   
Sbjct: 774 TTEQASLYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGR--- 830

Query: 809 SARALYGESGKLVSLLETLDRVRSKQEKCIIFAVNKRLQSFLSVTLGQIYNLGPLSVING 868
                   SGK++ L E L+ + ++ ++ + F         L   L   +      +   
Sbjct: 831 -------RSGKVIRLEEILEEILAEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYL 883

Query: 869 DAKAVAKRKSVPTRKSMISDFEAKEGFNLIVMSPVAAGVGLTVVGANHVVHLERYWNPAK 928
                 KR     R  M++ F++ +G  + ++S  A G GL +  ANHVVHL+R+WNPA 
Sbjct: 884 HGGTPRKR-----RDEMVARFQSGDGPPIFLLSLKAGGTGLNLTAANHVVHLDRWWNPAV 938

Query: 929 EAQATDRVYRIGQEKEVHIYIPLLHHPEFESFDVNLHRLLTQKTLLKDAVVT 980
           E QATDR +RIGQ + V +   +      E  D     ++ +K  L D VVT
Sbjct: 939 ENQATDRAFRIGQRRTVQVRKFICTGTLEEKID----EMIEEKKALADLVVT 986