Pairwise Alignments

Query, 1149 a.a., helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 1071 a.a., Snf2 family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  168 bits (426), Expect = 2e-45
 Identities = 136/470 (28%), Positives = 209/470 (44%), Gaps = 81/470 (17%)

Query: 486  GALLADDMGLGKTFMALSAIEHIYQRQQISGETKKPALIVAPLSLLENWKDEVDKTFKHS 545
            G +LAD+MGLGKT   LS ++H+ +  +I      P LIV P S+L NW+ E  K     
Sbjct: 629  GGILADEMGLGKTVQTLSFVQHMVESGKIG-----PNLIVVPTSVLPNWEREAQKFVPE- 682

Query: 546  PFKDVVILQSSAELNEYRMGGVEIRGQSASDDCLEPKYSLKVGKYFGPSRLDLPERLVIT 605
              K ++I  +  E                                 G  +L     LV+T
Sbjct: 683  -LKRLIIYGTRRE---------------------------------GMFKLIDESDLVVT 708

Query: 606  TYQTLRDYQFSMCLIDWGIVVFDEAQNIKNPNALQTRAAKGLKADFKLVATGTPVENSLA 665
            TY  LR     +    +  ++ DEAQNIKNPN +  R+ + +KAD +L  +GTP+EN+L 
Sbjct: 709  TYALLRRDLEELQNHTFNCIILDEAQNIKNPNTITARSVRRIKADMRLCLSGTPIENNLF 768

Query: 666  DFWCLMDTACPGHLGSYQEFRARYISPILKAAGDEVEEIRARLGRELRIAVGALMLRRIK 725
            + W L +   PG LGS   F+   I PI     + ++ +R R        V   +LRR K
Sbjct: 769  ELWSLFEFLMPGFLGSQHAFQRGVIKPIKDGDCETLDYLRTR--------VRPFILRRTK 820

Query: 726  EDNLKGLPLKHMYAGGEFENWKY---LEELKSTMVGYQRDVYEGAIS----HQLENEESH 778
             +  K LP K        EN  Y    EE         R + E  ++      L   +  
Sbjct: 821  SEVAKDLPPK-------IENTYYCALAEEQAELYTALARKLKEQVLADVDEKGLAKSQMS 873

Query: 779  ALTTLMRLRDSSLHPRLSDGGRLDIPKNAKSARALYGESGKLVSLLETLDRVRSKQEKCI 838
             L  L++LR    HPRL    +LD+P  + +       SGK  +  + +  +  +  K +
Sbjct: 874  ILDALLKLRQICCHPRLL---KLDMPGFSTNL-----PSGKFDAFKDMITDIVEEGHKVL 925

Query: 839  IFAVNKRLQSFLSVTLGQIYNLGPLSVINGDAKAVAKRKSVPTRKSMISDFEAKEGFNLI 898
            +F+   ++   +   L QI    P   ++G +K          R   +  F       + 
Sbjct: 926  VFSQFVQMLHIIRSWL-QISGT-PFCYLDGTSK---------DRFEQVDKFNNSPDIPIF 974

Query: 899  VMSPVAAGVGLTVVGANHVVHLERYWNPAKEAQATDRVYRIGQEKEVHIY 948
            ++S  A G GL +  A++V+H + +WNPA E+QATDR +RIGQ ++V  Y
Sbjct: 975  LISLKAGGTGLNLTSADYVIHYDPWWNPAVESQATDRTHRIGQTRQVFSY 1024