Pairwise Alignments

Query, 1149 a.a., helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 1154 a.a., Superfamily II DNA or RNA helicase, SNF2 family from Paraburkholderia bryophila 376MFSha3.1

 Score =  160 bits (404), Expect = 7e-43
 Identities = 151/548 (27%), Positives = 245/548 (44%), Gaps = 110/548 (20%)

Query: 463  HQDIGVRWILGVEQKSLSDSKVSGALLADDMGLGKTFMALSAIEHIYQRQQISGETKKPA 522
            +Q  G+ W+  + ++ L+       +LADDMGLGKT   L+   HI   ++ +G   +PA
Sbjct: 663  YQQQGLNWMQYLREQGLA------GVLADDMGLGKTVQTLA---HILAEKE-AGRLDRPA 712

Query: 523  LIVAPLSLLENWKDEVDKTFKHSPFKDVVILQSSAELNEYRMGGVEIRGQSASDDCLEPK 582
            LIV P +L+ NW++E  +    +P   V++L        +                    
Sbjct: 713  LIVVPTTLVHNWREEARR---FAPELKVLVLNGPQRKQRFD------------------- 750

Query: 583  YSLKVGKYFGPSRLDLPERLVITTYQTLRDYQFSMCLIDWGIVVFDEAQNIKNPNALQTR 642
               ++G++           L++TTY  L   Q  +   ++ +++ DEAQ +KN      +
Sbjct: 751  ---QIGEH----------ELILTTYALLWRDQKVLAEHEYHLLILDEAQYVKNATTKAAQ 797

Query: 643  AAKGLKADFKLVATGTPVENSLADFWCLMDTACPGHLGSYQEFRARYISPILKAAGDEVE 702
            A +GL A  +L  TGTP+EN L + W   D   PG LGS ++F  R+ +PI K   D V 
Sbjct: 798  AIRGLNARHRLCLTGTPLENHLGELWSQFDFLLPGFLGSQKDFTRRWRNPIEK-NNDGVR 856

Query: 703  EIRARLGRELRIAVGALMLRRIKEDNLKGLPLKHMYAGGEFENWKYLEELKSTMVGYQRD 762
              R+ L R +R      MLRR K++  K LP K                    + G QRD
Sbjct: 857  --RSLLARRIR----PFMLRRRKDEVAKELPAKTTIV------------CSVDLEGAQRD 898

Query: 763  VYE-----------GAISHQ-LENEESHALTTLMRLRDSSLHPRL-----SDGGRLDIPK 805
            +YE            A+S Q L       L  L++LR     PRL     + G  ++  +
Sbjct: 899  LYETVRTAMQEKVRAAVSAQGLARSHIIVLDALLKLRQVCCDPRLVRTLTATGEGVERSE 958

Query: 806  NA-----------KSARALYGESGKLVSLLETLDRVRSKQEKCIIFAVNKRLQSFLSVTL 854
            +A           K AR +   S KL  LL  L  +  +  + ++F+    + + ++  L
Sbjct: 959  DAAAKPASPDKAEKGARGM--RSAKLDLLLSMLPELIEEGRRVLLFSQFTGMLALIAEAL 1016

Query: 855  GQIYNLGPLSVINGDAKAVAKRKSVPTRKSMISDFEAKEGFNLIVMSPVAAGVGLTVVGA 914
             +     P  ++ GD            R + +  F+  E   L ++S  A GVGL +  A
Sbjct: 1017 DEA--AIPYVILTGD---------TTDRITPVERFQQGE-VPLFLISLKAGGVGLNLTAA 1064

Query: 915  NHVVHLERYWNPAKEAQATDRVYRIGQEKEVHIYIPLLHHPEFESFDVNLHRLLTQKTLL 974
            + V+H + +WNPA E QATDR +R+GQ+K V +Y  +       S +  +  L  QK  L
Sbjct: 1065 DTVIHYDPWWNPAAENQATDRAHRLGQDKPVFVYKLI----AAGSIEEKIVELQEQKAGL 1120

Query: 975  KDAVVTPE 982
             D++++ +
Sbjct: 1121 ADSILSED 1128