Pairwise Alignments

Query, 1149 a.a., helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 1082 a.a., SNF2-related protein (RefSeq) from Shewanella sp. ANA-3

 Score =  136 bits (343), Expect = 8e-36
 Identities = 138/495 (27%), Positives = 219/495 (44%), Gaps = 89/495 (17%)

Query: 463  HQDIGVRWILGVEQKSLSDSKVSGALLADDMGLGKTFMALSAIEHIYQRQQISGETKKPA 522
            +Q  G+ W+  +++  L      G +LADDMGLGKT   L+ +    + + + G+ + P+
Sbjct: 621  YQQQGLNWLCFLKEYQL------GGILADDMGLGKTIQTLAFLLKQQEAKSV-GQPRLPS 673

Query: 523  LIVAPLSLLENWKDEVDKTFKHSPFKDVVILQSSAELNEYRMGGVEIRGQSASDDCLEPK 582
            LI+ P SL+ NW  E  K                                        P 
Sbjct: 674  LIICPTSLVGNWAKEAAK--------------------------------------FAPS 695

Query: 583  YSLKV--GKYFGPSRLDLPE-RLVITTYQTL-RDYQFSMCLIDWGIVVFDEAQNIKNPNA 638
             +L V  G   GP    L E  +V+TTY  + RDY +      +  +V DEAQ IKN  A
Sbjct: 696  LTLAVIHGAQRGPLLSRLSEFDVVVTTYPLMVRDYDYYQAQ-PFEHIVLDEAQQIKNAQA 754

Query: 639  LQTRAAKGLKADFKLVATGTPVENSLADFWCLMDTACPGHLGSYQEFRARYISPILKAAG 698
              ++  K L+A F+L  TGTP+EN L +   LMD   PG LG+   F   +   I +   
Sbjct: 755  KVSQQIKALQAPFRLCLTGTPLENHLGELKSLMDFCLPGLLGTTAYFNKAFRYRIERYGD 814

Query: 699  DEVEEIRARLGRELRIAVGALMLRRIKEDNLKGLPLKHMYAGG---EFENWKYLEELKST 755
             E  ++ ++        +   +LRR K + +  LP K         E +     E ++ +
Sbjct: 815  SEQAKVLSQ-------RIAPFVLRRTKAEVVTELPPKTEILQTLELEKDQRNLYESIRLS 867

Query: 756  MVGYQRDVY--EGAISHQLENEESHALTTLMRLRDSSLHPRLSDGGRLDIPKNAKSARAL 813
            M    R+++  +G     +E      L  L++LR +   PRL    +L+  +  K+    
Sbjct: 868  MEKKIRELFATQGVAGSHIE-----FLDALLKLRQACCDPRLV---KLEQAQKVKN---- 915

Query: 814  YGESGKLVSLLETLDRVRSKQEKCIIFAVNKRLQSFLSVTLGQIYNLGPLSVINGDAKAV 873
               + KL  L + L  +  +  K +IF+       F S+ L  I  L  L  +N D   +
Sbjct: 916  ---NAKLNWLNQNLPEMVQEGRKILIFS------QFTSMLL-LIEEL--LQSLNIDYSKL 963

Query: 874  AKRKSVPTRKSMISDFEAKEGFNLIVMSPVAAGVGLTVVGANHVVHLERYWNPAKEAQAT 933
              +  +  R+  I  F+  +   + ++S  A G GL +  A+ V+H + +WNPA E QAT
Sbjct: 964  TGQTRL--RQGQIDKFQEGDT-PVFLISLKAGGTGLNLTAADTVIHYDPWWNPAAEKQAT 1020

Query: 934  DRVYRIGQEKEVHIY 948
            DR +RIGQE  V +Y
Sbjct: 1021 DRAHRIGQENPVFVY 1035