Pairwise Alignments

Query, 151 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., site-specific recombinase, phage integrase family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  189 bits (480), Expect = 4e-53
 Identities = 90/130 (69%), Positives = 108/130 (83%)

Query: 1   MKKRREHRIPLKEQMLALLEVMKPISGHRDFIFPSDRDPKKPCNSQTANMALKRMGFAGR 60
           MK RR+H+IPL EQ LALL  +KPISGHR++IFP+DRDPK   N QTAN ALKRMG   R
Sbjct: 274 MKMRRDHQIPLTEQTLALLAAIKPISGHREYIFPADRDPKTHSNVQTANAALKRMGLKDR 333

Query: 61  LVSHGLRSLASTTLNEQGFNPDLVEAALAHVDDNQVRSAYNRTDYLERRKPMMSWWSGHI 120
             +HG RSLASTTLNEQGF+PD++EAALAH D NQVRSAYNR+ YL+RR+ MM+WWS +I
Sbjct: 334 TTAHGFRSLASTTLNEQGFDPDVIEAALAHTDKNQVRSAYNRSIYLDRRREMMTWWSNYI 393

Query: 121 EEAAKGSLSV 130
            EAAKG++S+
Sbjct: 394 VEAAKGNVSL 403