Pairwise Alignments

Query, 411 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., Integrase from Dechlorosoma suillum PS

 Score =  217 bits (552), Expect = 6e-61
 Identities = 129/391 (32%), Positives = 209/391 (53%), Gaps = 9/391 (2%)

Query: 5   LTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMS 64
           LT   I+ +KP DK Y++SD   L+  V P+ S+ W+ +Y+  G++K+  L+ G YP++S
Sbjct: 3   LTELAIKASKPADKPYKVSDERGLFLLVNPNGSKYWRVKYRFLGKEKL--LALGVYPEVS 60

Query: 65  LAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKTL 124
           L +ARE+  +AR+ LA+G+DP   K+  K   +     +F+ VA +W A K         
Sbjct: 61  LKQARERRDDARRLLANGVDPGFHKQATKMAMVANAANSFEAVAREWWAKKSVGWSASYS 120

Query: 125 EGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAVN 184
               R  E   FP +G+ P++ +TAP  +A +R IE++G++ET     ++  +   YAV 
Sbjct: 121 NKVIRLFERDVFPWVGARPIADITAPEMLAVVRRIEARGVIETAHLALRVSGQAFRYAVV 180

Query: 185 SGVIHANPLAGIRDVFKKHKVVHMKAL-QPHEMHDLIRTVATANIQHVTRFLIEWQLHTM 243
           +G    +P+  +R      KV H  A+ +P ++ +L+R +   +   V    ++      
Sbjct: 181 TGRAERSPVGDLRGALPPVKVSHFAAITEPEKVGELLRAIDAFSGTFVVLCALKLAPLFF 240

Query: 244 VRPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREFIF 303
           VRP E   ARW + D+    W       K   +H+VPL  Q + IL  +  ++G  +F+F
Sbjct: 241 VRPGELRHARWRDFDLERGEWRYLV--TKTQTQHLVPLATQAIGILRELYALTGRGDFVF 298

Query: 304 PSSRNPKVPTDSETANKALGRMGFKDRT--TAHGLRALASTTLNEQ-GFEPDVIEAALAH 360
           P  R+   P    T N AL RMG+  +T  T HG RA+A T L E+   +P+VIE  LAH
Sbjct: 299 P-GRDRANPMSGATINAALRRMGYNTQTDITGHGFRAMARTILAEELHVKPEVIEHQLAH 357

Query: 361 TDKNQIRKAYNRTDYLDSRRKLMSWWSEHIE 391
              + +  AYNRT +L  RR +M  W+ +++
Sbjct: 358 RVPDNLGTAYNRTKFLKERRVMMQEWANYLD 388