Pairwise Alignments

Query, 411 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., Integrase from Dechlorosoma suillum PS

 Score =  246 bits (627), Expect = 1e-69
 Identities = 141/399 (35%), Positives = 217/399 (54%), Gaps = 9/399 (2%)

Query: 1   MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYK-RPGQDKITYLSFGT 59
           MA+ LT  +++ AKP +K Y+L DG  LY  VRPS ++ W++RY   P +D I   + G 
Sbjct: 1   MASPLTDTKVRNAKPAEKPYKLQDGQGLYLDVRPSGAKFWRYRYWITPEKDGI--YTIGE 58

Query: 60  YPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQI 119
           YP +SL++AR +   AR+Q   GI+P  AKE ++ + + E   TF+ VA +W        
Sbjct: 59  YPVVSLSDARREREWAREQAKQGINPTHAKEAERLRRMGEHANTFEAVAREWIDQNRNHW 118

Query: 120 KEKTLEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIM 179
            EK L    R L    FPK+G++P+  +T+   +  +R +E +G         Q   +I 
Sbjct: 119 TEKYLYQVERFLGNDVFPKIGALPIRMVTSAHLLGIIRTVEERGAKSIAVLIRQWSGQIF 178

Query: 180 NYAVNSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQ 239
            YAV +    ++P A +R   KK  V H   L   E+  ++  +        T    +  
Sbjct: 179 RYAVATLRADSDPSAPLRGAIKKDPVRHNPPLSKDEIPVMLNKLQKYGGYRGTVLATKLM 238

Query: 240 LHTMVRPNEASGARWEEIDMVNKLWIIPKERMKMNRE------HVVPLTAQTLAILEAIK 293
           L+T VR  E   A W E D+    W +P +RMKM ++      H+VPL+ Q L +L+ +K
Sbjct: 239 LYTFVRTVELRKAEWTEFDLEGGEWRVPADRMKMKKQMKVGESHIVPLSRQALEVLKELK 298

Query: 294 PISGHREFIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDV 353
            +SG R+F+FP+ R P     + T NKAL RMG+  + + HG RA AST L+E G+    
Sbjct: 299 TLSGGRKFLFPNLRTPDTCMTATTINKALERMGYAGKFSGHGFRATASTMLHELGWNEKA 358

Query: 354 IEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEK 392
           IE  LAH ++N+++ AYN  +YL  RR++M  WS+ I++
Sbjct: 359 IERQLAHAERNKVKAAYNHAEYLPERREMMQAWSDWIDE 397