Pairwise Alignments

Query, 411 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 413 a.a., integrase from Klebsiella michiganensis M5al

 Score =  365 bits (938), Expect = e-105
 Identities = 182/398 (45%), Positives = 259/398 (65%)

Query: 5   LTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMS 64
           L+ ++I++AKPK+  Y L DG  L   ++ S S+ WQFRY RP   K    S G YP ++
Sbjct: 8   LSVKEIESAKPKEADYVLYDGDGLELLIKTSGSKIWQFRYIRPVTKKRAKKSIGPYPSVT 67

Query: 65  LAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKTL 124
           LA+AR    E+R  LA  IDPQ  ++EQ   ++  +  TF+ VAE+W   K+  + E   
Sbjct: 68  LADARNYRAESRSLLAKQIDPQEHQQEQLRSSLEAKTNTFQLVAERWWNVKKASVTEDYA 127

Query: 125 EGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAVN 184
           E  WR LE   FP +G + V+ + A   + A++P++++G LETV+R  Q +NE+M YA N
Sbjct: 128 EDIWRSLERDVFPAIGDVSVTDIKAHTLVQAVQPVQARGALETVRRLCQRINEVMIYAQN 187

Query: 185 SGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTMV 244
           +G+I A P   I   F+K +  +M +++P ++  L++T+ TA+I   TR L  WQL T+ 
Sbjct: 188 TGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMQTMRTASISLSTRCLFMWQLLTIS 247

Query: 245 RPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREFIFP 304
           RP EA+ ARWEE+DM  + W IP  RMKMNR+H VPL+ + +A+LE +KP+SG+REFIFP
Sbjct: 248 RPAEAAEARWEEVDMEAREWKIPASRMKMNRDHTVPLSDEAMAVLEMMKPVSGNREFIFP 307

Query: 305 SSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHTDKN 364
           S   P  P +S+T N +L R GF     +HGLR++AST LNEQ F PDVIEAALAH DKN
Sbjct: 308 SRIKPNQPMNSQTVNASLKRAGFGGVLVSHGLRSIASTALNEQNFPPDVIEAALAHVDKN 367

Query: 365 QIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAG 402
           ++R+AYNRTDYL+ RR +M WW++ +  +  GS    G
Sbjct: 368 EVRRAYNRTDYLEQRRPMMQWWADFVMAADRGSMIEGG 405