Pairwise Alignments

Query, 411 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 413 a.a., Prophage integrase IntA from Enterobacter sp. TBS_079

 Score =  357 bits (916), Expect = e-103
 Identities = 186/405 (45%), Positives = 258/405 (63%)

Query: 5   LTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMS 64
           LT  +I+ AKPKD  Y+L DG  L   ++ S S+ WQFRY RP   + T  SFG YP +S
Sbjct: 8   LTDTEIKAAKPKDADYQLYDGDGLTLLIKSSGSKLWQFRYYRPLTKQRTKQSFGAYPAVS 67

Query: 65  LAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQWKATKEGQIKEKTL 124
           L++AR+   E+R  LA  IDPQ  ++EQ   +   +  TF  VAE+W   K+  + E   
Sbjct: 68  LSDARKLRAESRVLLAKDIDPQEHQKEQVRNSQEAKTNTFLLVAERWWNVKKTSVTEDYA 127

Query: 125 EGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAVN 184
           +  WR LE   FP +G I V+++ A   + A++P++++G LETV+R  Q +NE+M YA N
Sbjct: 128 DDIWRSLERDVFPAIGDISVTEIKAHTLVKAVQPVQARGALETVRRLCQRINEVMIYAQN 187

Query: 185 SGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTMV 244
           +G+I A P   I   F+K +  +M +++P ++  L++T+  A+I   TR L  WQL T+ 
Sbjct: 188 TGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMQTIRMASISLSTRCLFMWQLLTIT 247

Query: 245 RPNEASGARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREFIFP 304
           RP EA+ ARW+EID     W IP  RMKMNR+H VPL    +AILE +K +SG REFIFP
Sbjct: 248 RPAEAAEARWDEIDFDASEWKIPAARMKMNRDHTVPLPDGAIAILEMMKSLSGGREFIFP 307

Query: 305 SSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFEPDVIEAALAHTDKN 364
           S   P  P +S+T N AL R G      +HGLR++AST LNEQGF PDVIEAALAH DKN
Sbjct: 308 SRIKPTQPMNSQTVNAALKRAGLGGVLVSHGLRSIASTALNEQGFPPDVIEAALAHIDKN 367

Query: 365 QIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSVAGTGYLHLL 409
           ++R+AYNR+DYL+ RR +M WW++ + K+  GS   +G   L L+
Sbjct: 368 EVRRAYNRSDYLEQRRPMMQWWTDFVSKADSGSIVESGKTGLKLV 412