Pairwise Alignments

Query, 411 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., Prophage integrase IntA from Enterobacter sp. TBS_079

 Score =  221 bits (564), Expect = 2e-62
 Identities = 130/400 (32%), Positives = 213/400 (53%), Gaps = 22/400 (5%)

Query: 9   QIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMSLAEA 68
           ++++AKP+ K Y+L+DG  +   V P+ S+ W+ RY+  G++K+  L+ G YP++SLA+A
Sbjct: 7   KVRSAKPEAKAYKLTDGEGMVLLVHPNGSKYWRLRYRFGGKEKM--LALGKYPEVSLADA 64

Query: 69  REKALEARKQLADGIDPQLAKEEQKAKTITEQNA-TFKFVAEQWKATKEGQIKEKTLEGN 127
           R +  EARK LA+G+DP  ++ ++  K   EQ A TF+ VA  W A+ +      +    
Sbjct: 65  RARRDEARKLLANGVDP--SENKKAVKVEQEQEAITFEVVARDWHASNQKWSTSHSARV- 121

Query: 128 WRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAVNSGV 187
            + LE   F  +G   +  +     +  ++ +E  G LE   R  Q    IM +AV +G+
Sbjct: 122 LKSLEDNLFASVGKRNIKDIGTRDLLVPIKAVEKSGRLEVAARLQQRTTAIMRFAVQNGL 181

Query: 188 IHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTMVRPN 247
           I  NP   I       K  H  AL  + + +L+  +     + +TR  ++  L   +R +
Sbjct: 182 IDYNPAQEIAGAIATAKRKHRAALDLNRIPELLHRIDNYTGRPLTRLAVDLTLLVFIRSS 241

Query: 248 EASGARWEEIDMVNKLWIIPKER------------MKMNREHVVPLTAQTLAILEAIKPI 295
           E   ARW E+D    +W IP ER             KM   H+VPL+ Q LAILE IK +
Sbjct: 242 ELRFARWTEVDFETAMWTIPGEREPLEGVKHSQRGSKMRTPHLVPLSRQALAILEKIKSM 301

Query: 296 SGHREFIFPSSRNPKVPTDSETANKALGRMGF--KDRTTAHGLRALASTTLNEQG-FEPD 352
           +G+RE IF    +P+ P    T NKAL  MG+  K     HG R +A ++L E G +  D
Sbjct: 302 NGNRELIFVGDHDPRKPMSENTVNKALRVMGYDTKKEVCGHGFRTMACSSLIESGLWSRD 361

Query: 353 VIEAALAHTDKNQIRKAY-NRTDYLDSRRKLMSWWSEHIE 391
            +E  ++H +++ +R AY ++ ++L  RR ++ WW++ ++
Sbjct: 362 AVERQMSHQERSSVRAAYIHKAEHLGERRLMLQWWADFLD 401