Pairwise Alignments

Query, 411 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 418 a.a., Prophage integrase IntS from Enterobacter sp. TBS_079

 Score =  241 bits (616), Expect = 2e-68
 Identities = 144/412 (34%), Positives = 221/412 (53%), Gaps = 23/412 (5%)

Query: 5   LTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMS 64
           LT  +I+ AKP +K Y+L+D GN++  V P+ SR W+ RY+  G++K   L+ G YPD+S
Sbjct: 3   LTDAKIRAAKPDEKPYKLADSGNMFLLVHPNGSRYWRLRYRFLGKEKT--LALGVYPDVS 60

Query: 65  LAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQNATFKFVAEQW-KATKEGQIKEKT 123
           L+EAREK   ARKQ+A+G DP   ++++  K++ +   TF+ +A QW K+ K+       
Sbjct: 61  LSEAREKRDAARKQIAEGTDP--CEQKRIKKSVPDTAQTFEGIARQWHKSNKKWSASHS- 117

Query: 124 LEGNWRKLELYAFPKLGSIPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAV 183
            E   + LE + FP +GS  ++ L  P  +  ++  E++ + E   R  Q +  IM YA 
Sbjct: 118 -EKILKSLETHVFPFIGSRDITALKTPDLLIPVKAAEAKEIYEIAARLQQRITAIMRYAA 176

Query: 184 NSGVIHANPLAGIRDVFKKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTM 243
            SG+I  NP   +       K  H  AL  + + +L+  +     Q +TR   +  L   
Sbjct: 177 QSGIISYNPAVDMAGALTTVKRQHRPALALNRISELLGRLDAYRGQPLTRLATKLTLLIF 236

Query: 244 VRPNEASGARWEEIDMVNKLWIIPKER------------MKMNREHVVPLTAQTLAILEA 291
           +R +E   ARW EID    +W IP ER             KM  EH+VPL+ Q L IL+ 
Sbjct: 237 IRSSELRFARWSEIDFKKAMWTIPPERKPIDGVKYSHRGSKMRTEHLVPLSIQALDILQQ 296

Query: 292 IKPISGHREFIFPSSRNPKVPTDSETANKALGRMGF--KDRTTAHGLRALASTTLNEQG- 348
           I  ISG  E IF    NP  P    T N AL  MG+  K     HG RA+A ++L E G 
Sbjct: 297 IHNISGEHELIFTGDHNPWKPMSENTVNNALRLMGYDTKVDVCGHGFRAMACSSLIESGL 356

Query: 349 FEPDVIEAALAHTDKNQIRKAY-NRTDYLDSRRKLMSWWSEHIEKSSYGSYS 399
           +  D +E  ++H ++N +R AY ++ ++LD RR ++ WW++ ++ +   S S
Sbjct: 357 WSRDAVERQMSHQERNGVRAAYIHKAEFLDERRLMLQWWADFLDANRKKSVS 408