Pairwise Alignments

Query, 411 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 406 a.a., integrase from Paraburkholderia graminis OAS925

 Score =  146 bits (369), Expect = 1e-39
 Identities = 120/383 (31%), Positives = 181/383 (47%), Gaps = 26/383 (6%)

Query: 23  SDGGNLYFCVRPSNSRSWQFRYKRPGQDKITYLSFGTYPDMSLAEAREKALEARKQLADG 82
           SDGG LY  V PS S+SW FRY R    K   +  G Y ++SL  AREKA   R+ L +G
Sbjct: 23  SDGGGLYLQVSPSGSKSWIFRYAR--NKKSHEIGLGAYLNVSLESAREKAEGMRRALGNG 80

Query: 83  IDPQLAKEEQKAKTITEQNATFKFVAEQW-KATKEGQIKEKTLEGNWRKLELYAFPKLGS 141
            DP   ++ ++AK   +   TF   ++ + +A + G   EK  E     L  YA P +G 
Sbjct: 81  DDPLAMRQSERAKIAAKM--TFTECSDAYIEAHRHGWKNEKHAEQWTNTLATYAAPFIGK 138

Query: 142 IPVSKLTAPMAIAALRPIESQGLLETVKRTAQLMNEIMNYAVNSGVIHA-NPLAGIRDVF 200
             ++ +        L PI +    ET  R    + +++ +A   G+    NP       +
Sbjct: 139 KDIALVDTHDITRVLEPIWTTKN-ETASRVRGRLEKVLAWATTRGLRSGENPAR-----W 192

Query: 201 KKHK---VVHMKALQPHEMHDLIR--TVAT-----ANIQHVTRFLIEWQLHTMVRPNEAS 250
           K H    +    A+Q  E H  +    + T       +Q V    +E+ +    R  E  
Sbjct: 193 KGHLDTLLAKPSAVQKGEHHAALPYGDIGTFMDDLRGMQGVAARALEFCILNASRTAEII 252

Query: 251 GARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHREFIFPSSRNPK 310
           GA+W EID+  KLW +P ERMKM +EH VPL+ + +AIL+ ++  + H +F+FP  R   
Sbjct: 253 GAQWSEIDLDAKLWTVPAERMKMKKEHRVPLSKRAVAILKEMQ-AARHGDFVFPGMRE-G 310

Query: 311 VPTDSETANKALGRMGFKDRTTAHGLRALASTTLNE-QGFEPDVIEAALAHTDKNQIRKA 369
               + T    L RM  +   T HG R+       E   F  ++ E ALAH  ++++  A
Sbjct: 311 TGLSNMTLLAVLKRME-RQNLTVHGFRSTFRDWAAECTNFPRELAEKALAHAVRSEVEAA 369

Query: 370 YNRTDYLDSRRKLMSWWSEHIEK 392
           Y R D L  R K+M  W+ +  K
Sbjct: 370 YQRGDLLAKRGKMMEAWAAYCAK 392