Pairwise Alignments

Query, 1016 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1024 a.a., acriflavin resistance protein (RefSeq) from Shewanella loihica PV-4

 Score =  785 bits (2026), Expect = 0.0
 Identities = 424/1026 (41%), Positives = 647/1026 (63%), Gaps = 15/1026 (1%)

Query: 1    MDIARYTLAKRTSVWVLIALTLIGGYISYLKLGRFEDPEFVIRQAVIVTPYPGATAQEVS 60
            M+ A Y++  +   W+   L LIGG +S++ LG+ E PEF I++A++VT YPGA+ ++V 
Sbjct: 1    MNFAEYSITHKVVSWMFALLLLIGGSLSFMSLGQLEFPEFTIKEALVVTAYPGASPEQVE 60

Query: 61   DEVTDVIEGAVQALQELKEVKSVSMQGRSEVTVEIKLEFAKSSAQLQQVWDKLRRKVADA 120
            +EVT  +E A+Q L  +K + S++  G S++ +E++ ++   + +L Q+WD +RRKV+D 
Sbjct: 61   EEVTLPLEDALQQLDGVKHITSINSAGLSQIQIEMEDKY--DAEKLPQIWDLVRRKVSDT 118

Query: 121  QRQLPPGAGASIVNDDFSDVYALFYAVTGEGFSDKQLQDYVDTLRRELVLVPGVAKAATL 180
            Q  LP GA    V DDF DVY +   ++G+G+S+++L++Y D LRRELVLV G+ +    
Sbjct: 119  QGSLPSGAMTPQVIDDFGDVYGILLNLSGDGYSERELENYADFLRRELVLVDGIKRVNIA 178

Query: 181  AEQQEAIFIEMSSERMAEFGLSVERVLQVLQKQSLVTVAGSVDAQQMRIPVIPKSNISSL 240
                + + +E+S++++   GL+ + +  ++  Q++V+ AGS+     RI + P     S+
Sbjct: 179  GIVDQQVVVEISTQKINALGLNQDYIYGLINSQNVVSNAGSIRVGDNRIRIHPTGEFDSV 238

Query: 241  ADLTNLQVAVGSNNAVVRLGDIANISRGYTEPASMLMRYNGQRAIGFGISNVTGGNVVEM 300
              L+ L V+   +  ++ LGDIANI +   E  S L    G  A+  GI+  +G NVV++
Sbjct: 239  EALSRLVVSAPGSAKLIYLGDIANIYKAMDETPSNLYHSGGDMALSVGIAFSSGVNVVKV 298

Query: 301  GDAVKARLAELESQRPLGMDLHVISMQSDSVRASVANFIDNLIAAVAIVFVVLLLFMGVR 360
            G+AV  ++  L  + P+GM L  +  QS  V  ++  F+ NL  ++AIV  VLL+FMG+R
Sbjct: 299  GEAVNQKMMALSDELPVGMMLTTVYDQSKMVDQTINGFLVNLAESIAIVIGVLLIFMGLR 358

Query: 361  SGVIIGFVLLLTVAGTLCVMLIDDIAMQRISLGALIIALGMLVDNAIVVTDGVLVRFQQE 420
            SG+++G VLLLT+ GT  +M + +I +Q ISLGALIIALGMLVDNAIVVT+G+++  ++ 
Sbjct: 359  SGLLMGLVLLLTILGTFIMMKVLNIELQIISLGALIIALGMLVDNAIVVTEGIIIGLKR- 417

Query: 421  PNADKQQVVSEVVNATKWPLLGGTVVGIFAFSAIGLSPSDMGEYAGSLFWVILYSMFLSW 480
                + +   +V+  T+WPLLG TV+ I AF+ IGLS +  GE+  SLF V+L S+F+SW
Sbjct: 418  -GQSRLETAKQVITQTQWPLLGATVIAIIAFAPIGLSDNATGEFCISLFLVLLISLFISW 476

Query: 481  VFAVTVTPMLCHDFLRVKAPTKEA--KPSK--LVTGYKAVLQWVLSHRVVSCAMLLGTLV 536
            + A+T+TP  C    +      EA   P K  L   Y+  L   +  R ++  ++L  LV
Sbjct: 477  ITAMTLTPFFCDLLFKDGEIPDEADSDPYKGWLFQLYRGSLSLAMRFRGLTLLVVLLALV 536

Query: 537  AAVWGAQFIPPGFMPESQRPQFVVDVYLPQGSDIRRTEQVVASIEKDV-----TQKDGIT 591
             +V G   +   F P S  P F VDV++P+GSDI+ TE ++  IE+D+      Q  G+ 
Sbjct: 537  GSVMGFGQVKNVFFPASNTPIFFVDVWMPEGSDIKATEALLGRIEQDLMAEQEKQDLGLV 596

Query: 592  NITSFIGGGGLRFMLTYSPEARNPSYGQLLIDIDDYTKIAPLVGELQNELDAKYPDASIK 651
            NITS +G G  RF+L Y PE    +YGQLLI++ +   +   +  L+ +L   YP+A  +
Sbjct: 597  NITSVVGQGAQRFVLPYVPEKGYAAYGQLLIEMSNLETLNAYMRRLEQDLVQHYPEAEYR 656

Query: 652  VWKFMLGRGGGKKIEAGFKGPDSHVLRQLAEQAKAIMHNDPNLIAVQDDWRQQVPVLQPV 711
                  G     KIEA F G D  VLRQLA+QA  I   +P+  +V+ +WR QV +++P 
Sbjct: 657  FKYMENGPSPAAKIEARFYGEDPEVLRQLAQQASEIFLAEPSATSVRHNWRNQVTLVRPQ 716

Query: 712  YSAQEAQRLGLTTQEISAAIAQTLNGRNVGVYREGNDLIPLMVRAPENERHHERAIENSE 771
             +  +A+  G++ Q++  A+    +G++VG+YRE + L+P++ RAP +ER +  +I   +
Sbjct: 717  LALAQARETGISKQDLDNALLTNFSGKHVGLYRENSHLLPIIARAPADERLNADSISALQ 776

Query: 772  VFSAQAGRYIPVSQLVDSVDTVYQDALLRRINRMPTILVQADPA-PGVMTADA-FNNVRE 829
            V+S +   ++P+SQ+V    T ++D L+ R +R   I V ADP   G  TAD+ F  +R 
Sbjct: 777  VWSTENNVFVPISQVVSDFTTEWEDPLIMRRDRKRVISVLADPLNGGNETADSVFRKLRP 836

Query: 830  KIEQIELPAGYELIWYGEYKASKDANEGLALSAPYGFAAMILAVVFMFNALRQPLVIWMT 889
            K+E I LPAGYEL W GEY+ S +A + +  S P G+ AM L  V +FN++RQPLVIW T
Sbjct: 837  KVEAISLPAGYELEWGGEYETSSEAQQSVFSSIPLGYLAMFLITVLLFNSVRQPLVIWFT 896

Query: 890  APFAVVGVTIGLIAFQTPFEFMAILGFLSLIGMMVKNAIVLVDQADAEIRAGKEAYFAII 949
             P A++GV  GL+ F  PF FMA+LG LSL GM++KN IVLVDQ + E+  GK+AY A+ 
Sbjct: 897  VPLALIGVVSGLLLFDAPFSFMALLGLLSLTGMIIKNGIVLVDQINLELSQGKDAYRAVF 956

Query: 950  DAAVSRARPVLLGAFTTILGVAPLLVDPFFKSMAVTIMFGLLFATILTLVVIPLFYAVLF 1009
            D++VSR RPVL+ A TT+LG+ PLL D FF SMA+TI+FGL FA++LTLVV+P+ Y ++F
Sbjct: 957  DSSVSRVRPVLMAAITTMLGMIPLLPDAFFGSMAITIIFGLGFASVLTLVVLPVAYTLVF 1016

Query: 1010 RVKVAK 1015
             +KV K
Sbjct: 1017 GIKVPK 1022