Pairwise Alignments

Query, 1016 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1042 a.a., acriflavin resistance protein from Burkholderia phytofirmans PsJN

 Score =  513 bits (1322), Expect = e-149
 Identities = 323/1030 (31%), Positives = 536/1030 (52%), Gaps = 33/1030 (3%)

Query: 2    DIARYTLAKRTSVWVLIALTLIGGYISYLKLGRFEDPEFVIRQAVIVTPYPGATAQEVSD 61
            +++ + L  +  V  LIAL    G ++Y +L + EDP F  R  VI T +PGATA++V +
Sbjct: 11   NLSAWALRHQALVVFLIALATAFGILAYTRLAQSEDPPFTFRVMVIRTFWPGATARQVQE 70

Query: 62   EVTDVIEGAVQALQELKEVKSVSMQGRSEVTVEIKLEFAKSSAQLQQV---WDKLRRKVA 118
            +VTD I   +Q    +  V+S S  G S +   +K      SA ++ V   W ++R+KV 
Sbjct: 71   QVTDRIGRKLQETPAIDFVRSYSRPGESLMFFSMK-----DSAPVKDVPETWYQVRKKVG 125

Query: 119  DAQRQLPPGAGASIVNDDFSDVYALFYAVTGEGFSDKQLQDYVDTLRRELVLVPGVAKAA 178
            D    LP G      ND+F DVY   Y + G+GFS  QL DY D LR  L+ VPGVAK  
Sbjct: 126  DIAATLPQGIQGPFFNDEFGDVYTNIYTLEGDGFSPAQLHDYADQLRTVLLRVPGVAKVD 185

Query: 179  TLAEQQEAIFIEMSSERMAEFGLSVERVLQVLQKQSLVTVAGSVDAQQMRIPVIPKSNIS 238
               +  + I+IE+++ ++   G+S +++ Q +  Q+ V+ AG++     R+ V P     
Sbjct: 186  YFGDPDQHIYIEIANTQLTRLGISPQQLGQAINSQNSVSQAGTLTTADDRVFVRPTGQFK 245

Query: 239  SLADLTNLQVAVGSNNAVVRLGDIANISRGYTEPASMLMRYNGQRAIGFGISNVTGGNVV 298
             +  L +  + +  NN   RLGDIA I RGY +P    MR  G+  +G G++   GG+V+
Sbjct: 246  DVNALADTLIRI--NNRSFRLGDIATIKRGYDDPVVTQMRAGGKAVLGIGVTMQPGGDVI 303

Query: 299  EMGDAVKARLAELESQRPLGMDLHVISMQSDSVRASVANFIDNLIAAVAIVFVVLLLFMG 358
             +G A+  ++A+L    P G+ L  +S   D+V  SV +F++ +  AVAIV VV L+ +G
Sbjct: 304  RLGKALDQQMAQLRKALPAGLQLVEVSSMPDAVARSVDDFLEAVAEAVAIVLVVSLVSLG 363

Query: 359  VRSGVIIGFVLLLTVAGTLCVMLIDDIAMQRISLGALIIALGMLVDNAIVVTDGVLVRFQ 418
            +R+G+++   + + +A T   M + DI + ++SLG L++ALG+LVD+AI+  + + V+ +
Sbjct: 364  LRTGMVVVISIPVVLAVTALCMYLFDIGLHKVSLGTLVLALGLLVDDAIIAVEMMSVKLE 423

Query: 419  QEPNADKQQVVSEVVNATKWPLLGGTVVGIFAFSAIGLSPSDMGEYAGSLFWVILYSMFL 478
            Q  N  + +  +    +T +P+L GT+V +  F  I L+ S  GEY  S+F V   ++  
Sbjct: 424  QGWN--RTRAAAYAYTSTAFPMLTGTLVTVSGFLPIALAKSSTGEYTRSIFEVSAIALIA 481

Query: 479  SWVFAVTVTPMLCHDFL-RVKAPTKEAK----------PSKLVTGYKAVLQWVLSHRVVS 527
            SW+ AV + P+L +  L   K    EA            ++     +  + W +  R V 
Sbjct: 482  SWLAAVVLIPLLGYHLLPERKREAHEAHLPDDHEHDIYDTRFYRRLRGWIGWCIERRFVV 541

Query: 528  CAMLLGTLVAAVWGAQFIPPGFMPESQRPQFVVDVYLPQGSDIRRTEQVVASIEKDVTQK 587
             A+ +     A+ G   +P  F P S RP+ +VDV LP+G+    T +    +EK +  +
Sbjct: 542  LAITVALFALAMAGFTLVPQQFFPSSDRPELLVDVRLPEGASFEATLRQAQRLEKALVGR 601

Query: 588  DGITNITSFIGGGGLRFMLTYSPEARNPSYGQLLIDIDDYTKIAPLVGELQNELDAKYPD 647
              I +   F+G G  RF L    +   P++ Q +I          L   L+ EL   +P 
Sbjct: 602  PEIDHTVDFVGTGAPRFYLPLDQQLPQPNFAQFVITAKSVKDREKLAQWLEPELRNNFPA 661

Query: 648  ASIKVWKFMLGRGGGKKIEAGFKGPDSHVLRQLAEQAKAIMHNDPNLIAVQDDWRQQVPV 707
               ++ +   G   G  ++    G D   +R +AE+  A +  D     VQ DW +  P 
Sbjct: 662  IRTRLSRLENGPPVGYPVQFRVSGDDIATVRSIAERVAATLRADRGTRNVQFDWDE--PA 719

Query: 708  LQPV---YSAQEAQRLGLTTQEISAAIAQTLNGRNVGVYREGNDLIPLMVRAPENERHHE 764
             + V      ++A+ LG+++ +IS+ +A TL+G  V  YRE + LI + +RAP+ ER   
Sbjct: 720  ERSVRFEVDQKKARELGVSSDDISSFLAMTLSGYTVTQYRERDKLISVDLRAPKAERVDP 779

Query: 765  RAIENSEVFSAQAGRYIPVSQLVDSVDTVYQDALLRRINRMPTILVQADPAPGVMTADAF 824
              +    + +      +P+  L    + +    +  R +R PT+ VQ+D APG    D  
Sbjct: 780  AQLVTLAMPTPNGP--VPLGTLGHLRNDLEYGVIWER-DRQPTLTVQSDVAPGAQGIDVT 836

Query: 825  NNVREKIEQIE--LPAGYELIWYGEYKASKDANEGLALSAPYGFAAMILAVVFMFNALRQ 882
            + V + +  I   LP GY +   G  + S      +    P    A++  ++    +  +
Sbjct: 837  HAVDKALGPIRAALPVGYRIEIGGSVEESGKGQTSINAQMPIMIIAVLTLLMIQLQSFAR 896

Query: 883  PLVIWMTAPFAVVGVTIGLIAFQTPFEFMAILGFLSLIGMMVKNAIVLVDQADAEIRAGK 942
             L++ +TAP  ++GV + L+ F  PF F+A+LG +++ G++++N+++LVDQ + +I +G 
Sbjct: 897  VLMVVLTAPLGLIGVVLTLLLFGQPFGFVAMLGVIAMFGIIMRNSVILVDQIEQDIASGH 956

Query: 943  EAYFAIIDAAVSRARPVLLGAFTTILGVAPLLVDPFFKSMAVTIMFGLLFATILTLVVIP 1002
            + + AI+ A V R RP+ L A   +L + PLL   FF  MA  +M G+  ATILTL  +P
Sbjct: 957  KRFDAIVGATVRRFRPITLTAAAAVLALIPLLRSNFFGPMATALMGGITSATILTLFYLP 1016

Query: 1003 LFYAVLFRVK 1012
              YAV FRV+
Sbjct: 1017 ALYAVSFRVR 1026