Pairwise Alignments

Query, 1016 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1009 a.a., acriflavin resistance protein (RefSeq) from Shewanella sp. ANA-3

 Score =  850 bits (2195), Expect = 0.0
 Identities = 448/1014 (44%), Positives = 650/1014 (64%), Gaps = 9/1014 (0%)

Query: 1    MDIARYTLAKRTSVWVLIALTLIGGYISYLKLGRFEDPEFVIRQAVIVTPYPGATAQEVS 60
            M IA   +  R    VL  + LI G   +  + R EDPEF I+ A+I+TPY GA+A EV 
Sbjct: 1    MSIASVAINNRVVTLVLTVVMLIAGLYIFNGMSRLEDPEFTIKDALIITPYNGASALEVE 60

Query: 61   DEVTDVIEGAVQALQELKEVKSVSMQGRSEVTVEIKLEFAKSSAQLQQVWDKLRRKVADA 120
             EVT+++E  VQ L EL +V S S +G S +TV IK ++ K +  L QVW+KLR+K+ D 
Sbjct: 61   QEVTELLEKTVQQLGELDKVTSKSERGLSTITVTIKEQYNKET--LPQVWNKLRQKIDDV 118

Query: 121  QRQLPPGAGASIVNDDFSDVYALFYAVTGEGFSDKQLQDYVDTLRRELVLVPGVAKAATL 180
            +  LPPGAG S+V DD+ DVY++F  V+G+G+S K+L+ YV+ L+++L+LV GV K  T 
Sbjct: 119  KYYLPPGAGPSLVIDDYGDVYSIFMVVSGDGYSFKELKTYVNDLQQQLLLVNGVGKITTF 178

Query: 181  AEQQEAIFIEMSSERMAEFGLSVERVLQVLQKQSLVTVAGSVDAQQMRIPVIPKSNISSL 240
             E+ EAI+IE +  RMA+ G+S E V   L  + LV  AG        I V      + +
Sbjct: 179  GEKSEAIYIEFNRSRMAQLGISPEIVAAQLNGKGLVVDAGRAHVGSSSIAVSTTGGFTKV 238

Query: 241  ADLTNLQVAVGSNNAVVRLGDIANISRGYTEPASMLMRYNGQRAIGFGISNVTGGNVVEM 300
            +D   L +   +      L DIA +SRGY  P++ L+ ++G+  IG GIS V+GGN V+M
Sbjct: 239  SDFEKLLITHDTKQFY--LSDIAKVSRGYVSPSTQLINFDGKAGIGLGISTVSGGNTVDM 296

Query: 301  GDAVKARLAELESQRPLGMDLHVISMQSDSVRASVANFIDNLIAAVAIVFVVLLLFMGVR 360
            G+AV A+L+ELESQRP G++   +S+QS+ V+ +++ F  +L  AV IV VVLL FMG+R
Sbjct: 297  GEAVLAKLSELESQRPAGIEFGYVSLQSEGVKEAISGFTSSLAEAVIIVIVVLLFFMGLR 356

Query: 361  SGVIIGFVLLLTVAGTLCVMLIDDIAMQRISLGALIIALGMLVDNAIVVTDGVLVRFQQE 420
            SG++IGFVL+LT+AG+   +    +A++RISLGALIIALGMLVDNAIVV DG+L+R Q+ 
Sbjct: 357  SGLLIGFVLILTIAGSFIFLAPMGVALERISLGALIIALGMLVDNAIVVVDGILIRMQKG 416

Query: 421  PNADKQQVVSEVVNATKWPLLGGTVVGIFAFSAIGLSPSDMGEYAGSLFWVILYSMFLSW 480
             +A+       VVN + WPLLG T++ I AF+AIG S    GEY  SLF V++ S+ LSW
Sbjct: 417  ESAES--AAPRVVNQSAWPLLGATLIAILAFAAIGTSNDATGEYCRSLFQVVMVSLLLSW 474

Query: 481  VFAVTVTPMLCHDFLRVKAPTKEAKPSK--LVTGYKAVLQWVLSHRVVSCAMLLGTLVAA 538
            V AVT+TP+LC  +L+    T +  P +    T Y+ +L   + HR +S A ++G    +
Sbjct: 475  VTAVTITPLLCVMYLKAPKSTDKTSPYQGTFYTKYRGLLASSIRHRYLSSASIIGIFALS 534

Query: 539  VWGAQFIPPGFMPESQRPQFVVDVYLPQGSDIRRTEQVVASIEKDVTQKDGITNITSFIG 598
            +WG  F+   F P S R QF+VD +LPQG+ I  T++   S+E  +     + ++T+ IG
Sbjct: 535  LWGFSFVQQNFFPSSTRAQFMVDFWLPQGTHIEETQKHAESVENYLGNLANVEHVTTTIG 594

Query: 599  GGGLRFMLTYSPEARNPSYGQLLIDIDDYTKIAPLVGELQNELDAKYPDASIKVWKFMLG 658
             G LRF+LTY P+  N SY Q L+D+DDYT I  L+ +++ EL  KYPDA +    F LG
Sbjct: 595  EGALRFLLTYQPQQSNSSYAQFLVDVDDYTVIKTLIPKIEVELLQKYPDALVYASPFELG 654

Query: 659  RGGGKKIEAGFKGPDSHVLRQLAEQAKAIMHNDPNLIAVQDDWRQQVPVLQPVYSAQEAQ 718
             G   KI+A   GPD+ VLR+ +++   +   + N   V+ DWR +   ++ V + ++A 
Sbjct: 655  TGTAGKIQARISGPDTDVLRETSDKVLEVFSKESNTKGVRTDWRNKQLYIEAVLAEEQAN 714

Query: 719  RLGLTTQEISAAIAQTLNGRNVGVYREGNDLIPLMVRAPENERHHERAIENSEVFSAQAG 778
              G+    ++ AI ++  G   GVYRE + L+P+++RA ENER     IEN +++S  A 
Sbjct: 715  INGINRGMVAEAIKESFEGVTTGVYRENDLLLPIIIRANENERSDITNIENVQIWSPNAQ 774

Query: 779  RYIPVSQLVDSVDTVYQDALLRRINRMPTILVQADPAPGVMTADAFNNVREKIEQIELPA 838
            + IP+ Q+V S +T ++D L+ R NR  TI + ADP  G   ++    ++ ++E I++P 
Sbjct: 775  KMIPLRQVVQSFETKFEDGLILRRNRERTITIFADPVTGT-ASELLATLKPQVEAIKIPP 833

Query: 839  GYELIWYGEYKASKDANEGLALSAPYGFAAMILAVVFMFNALRQPLVIWMTAPFAVVGVT 898
            GY L W GEY+ S  A +GLA S P    +MIL  + +FN+L+Q LVIW+  P A++GVT
Sbjct: 834  GYTLEWGGEYEDSSKAEKGLASSIPIFILSMILITIVIFNSLKQTLVIWLCVPLALIGVT 893

Query: 899  IGLIAFQTPFEFMAILGFLSLIGMMVKNAIVLVDQADAEIRAGKEAYFAIIDAAVSRARP 958
             G++A   PF FMA+LGFLSLIGM++KNAIVLVD+ + E   GK    +I+D+ VSR RP
Sbjct: 894  AGMLATNQPFGFMALLGFLSLIGMLIKNAIVLVDEINLEQSQGKSLINSILDSGVSRLRP 953

Query: 959  VLLGAFTTILGVAPLLVDPFFKSMAVTIMFGLLFATILTLVVIPLFYAVLFRVK 1012
            V + A TT LG+ PL+ D FF SMAVTI+ GL+FAT LT++V+P+ YA++F+ +
Sbjct: 954  VAMAALTTALGMIPLIFDAFFVSMAVTIISGLMFATALTMIVLPIVYALIFKAE 1007