Pairwise Alignments

Query, 1016 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1027 a.a., acriflavin resistance protein (RefSeq) from Shewanella sp. ANA-3

 Score =  830 bits (2145), Expect = 0.0
 Identities = 434/1022 (42%), Positives = 658/1022 (64%), Gaps = 14/1022 (1%)

Query: 1    MDIARYTLAKRTSVWVLIALTLIGGYISYLKLGRFEDPEFVIRQAVIVTPYPGATAQEVS 60
            M+IA Y++  +   W+ + L L+GG +S+  LG+ E PEF I++A+++T YPGA+ ++V 
Sbjct: 1    MNIAEYSIRHKVISWMFVLLLLVGGGVSFTGLGQLEFPEFTIKEALVITAYPGASPEQVE 60

Query: 61   DEVTDVIEGAVQALQELKEVKSVSMQGRSEVTVEIKLEFAKSSAQLQQVWDKLRRKVADA 120
            +EVT  +E A+Q L  +K V S++  G S++ +EIK  + K+S  L QVWD++RRKV D 
Sbjct: 61   EEVTLPLEDALQQLDAVKHVTSINSAGLSQIQIEIKETYDKTS--LPQVWDEVRRKVNDT 118

Query: 121  QRQLPPGAGASIVNDDFSDVYALFYAVTGEGFSDKQLQDYVDTLRRELVLVPGVAKAATL 180
              QLPPG     V DDF DVY + + ++G  +S+++L +Y D LRRELVLVPGV K +  
Sbjct: 119  AGQLPPGTSTPKVYDDFGDVYGILFNLSGPDYSNRELSNYADYLRRELVLVPGVKKVSVA 178

Query: 181  AEQQEAIFIEMSSERMAEFGLSVERVLQVLQKQSLVTVAGSVDAQQMRIPVIPKSNISSL 240
                E + IE+S ++++  GL    +  ++  Q++V+ AGS+     RI + P    SS+
Sbjct: 179  GSVTEQVVIEISQQKLSALGLDQSYIYGLINNQNVVSNAGSLVVGDNRIRIHPTGEFSSV 238

Query: 241  ADLTNLQVAVGSNNAVVRLGDIANISRGYTEPASMLMRYNGQRAIGFGISNVTGGNVVEM 300
             DL  L V+   +  ++ LGDIA+I + Y E   +L    G+ A+  GIS  +G NVVE+
Sbjct: 239  QDLARLIVSPPGSTELIYLGDIAHIEKDYDETPDVLYHNRGEAALSLGISFSSGVNVVEV 298

Query: 301  GDAVKARLAELESQRPLGMDLHVISMQSDSVRASVANFIDNLIAAVAIVFVVLLLFMGVR 360
            G +V  RLAELESQRP+GM+L  +  QS +V  +V  F+ NL+ ++AIV  VLLLFMG+R
Sbjct: 299  GKSVSERLAELESQRPIGMNLDTVYNQSLAVDDTVNGFLINLLESIAIVIAVLLLFMGLR 358

Query: 361  SGVIIGFVLLLTVAGTLCVMLIDDIAMQRISLGALIIALGMLVDNAIVVTDGVLVRFQQE 420
            SG+++G +LLLT+ GT  VM +  I +Q ISLGALIIALGMLVDNAIVVT+G+L+  ++ 
Sbjct: 359  SGLLMGLILLLTILGTFIVMKVLGIELQLISLGALIIALGMLVDNAIVVTEGILIGLRR- 417

Query: 421  PNADKQQVVSEVVNATKWPLLGGTVVGIFAFSAIGLSPSDMGEYAGSLFWVILYSMFLSW 480
                + +   ++V  T+WPLLG TV+ I AF+ IGLS +  GE+  SLF V++ S+F+SW
Sbjct: 418  -GKTRLEAAKQIVTQTQWPLLGATVIAIIAFAPIGLSQNAAGEFCRSLFQVLMISLFISW 476

Query: 481  VFAVTVTPMLCH-DFLRVKAPTKEAKPSK--LVTGYKAVLQWVLSHRVVSCAMLLGTLVA 537
            + A+T+TP  CH  F    A  +E  P K    + Y+A L + L  R+ S  ++   LV 
Sbjct: 477  ITAITLTPFFCHLLFKDAPADDEEQDPYKGWFFSLYRASLTFALRFRIASILLVGAMLVT 536

Query: 538  AVWGAQFIPPGFMPESQRPQFVVDVYLPQGSDIRRTEQVVASIEKDV-----TQKDGITN 592
            AV G   I   F P S  P F VD+++P+G+DI+ TE+  A IE+ +      Q  G+ +
Sbjct: 537  AVIGFGHIKNVFFPASNTPIFFVDIWMPEGTDIKGTERFTADIEQLLLKQAEEQHSGLKH 596

Query: 593  ITSFIGGGGLRFMLTYSPEARNPSYGQLLIDIDDYTKIAPLVGELQNELDAKYPDASIKV 652
            +T+ IG G  RF+L Y PE   P++ QL+I+++D   +   + EL+ +L+ ++P A  + 
Sbjct: 597  LTTVIGQGAQRFVLPYQPEKGYPAFAQLIIEMEDLASLKVYMSELERQLNQRFPQAQYRF 656

Query: 653  WKFMLGRGGGKKIEAGFKGPDSHVLRQLAEQAKAIMHNDPNLIAVQDDWRQQVPVLQPVY 712
                 G     KIEA F G D  VLR L  QA+AI H +P++  V+ DWR QVP+++P  
Sbjct: 657  KNMENGPSPAAKIEARFYGDDPEVLRALGAQAEAIFHAEPSMDGVRHDWRNQVPLIRPQL 716

Query: 713  SAQEAQRLGLTTQEISAAIAQTLNGRNVGVYREGNDLIPLMVRAPENERHHERAIENSEV 772
               +A+  G++ Q++  A+    +G+ +G+YRE + L+P++ RAP  ER    ++   ++
Sbjct: 717  QNAQARETGISKQDLDNALLINFSGKQIGLYRETSHLLPIVARAPAEERLQADSLWKLQI 776

Query: 773  FSAQAGRYIPVSQLVDSVDTVYQDALLRRINRMPTILVQADPAPGV-MTADA-FNNVREK 830
            +S++   ++P +Q+V   +T +++ L++R +RM  + V ADP  G   TAD+    V++K
Sbjct: 777  WSSEHSTFVPATQVVSQFETQWENPLVKRRDRMRMLAVLADPKLGSDETADSVLRKVKDK 836

Query: 831  IEQIELPAGYELIWYGEYKASKDANEGLALSAPYGFAAMILAVVFMFNALRQPLVIWMTA 890
            +E I +PAGY L W GEY+ + +A   +  S P G+ AM L  VF+FN++RQPLVIW T 
Sbjct: 837  VEAISIPAGYHLEWGGEYETAGEAQTAVFSSIPLGYLAMFLITVFLFNSVRQPLVIWFTV 896

Query: 891  PFAVVGVTIGLIAFQTPFEFMAILGFLSLIGMMVKNAIVLVDQADAEIRAGKEAYFAIID 950
            P A++GV+ GL+ F  PF FMA+LG LSL GM++KN IVLVDQ + E+  GK AY A++D
Sbjct: 897  PLALIGVSAGLLIFDAPFSFMALLGLLSLSGMVIKNGIVLVDQINLELDEGKPAYIALVD 956

Query: 951  AAVSRARPVLLGAFTTILGVAPLLVDPFFKSMAVTIMFGLLFATILTLVVIPLFYAVLFR 1010
            ++VSR RPV++ A TT+LG+ PL+ D FF SMA+TI+FGL FA++LTL+V+P+ Y++ F 
Sbjct: 957  SSVSRVRPVMMAAITTMLGMIPLIPDAFFGSMAITIIFGLGFASLLTLIVLPVMYSLAFN 1016

Query: 1011 VK 1012
            +K
Sbjct: 1017 IK 1018