Pairwise Alignments

Query, 1016 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1035 a.a., acriflavin resistance protein (RefSeq) from Shewanella sp. ANA-3

 Score =  648 bits (1672), Expect = 0.0
 Identities = 384/1024 (37%), Positives = 584/1024 (57%), Gaps = 30/1024 (2%)

Query: 1    MDIARYTLAKRTSVWVLIALTLIGGYISYLKLGRFEDPEFVIRQAVIVTPYPGATAQEVS 60
            M ++ + L ++T V     L++I G  SY  LG+ EDP F ++ AVIVT YPGA A+EV 
Sbjct: 1    MSLSTFALRQKTFVIFFTVLSIIAGIYSYFDLGKLEDPSFTVKSAVIVTLYPGANAKEVE 60

Query: 61   DEVTDVIEGAVQALQELKEVKSVSMQGRSEVTVEIKLEFAKSSAQLQQVWDKLRRKVADA 120
              VTD IE  ++ ++ L +++S+S  G S + V++K +   +S  L Q WD +RRKV D 
Sbjct: 61   QLVTDKIETKLEEMESLWKLRSLSRPGSSMIFVDLKEKV--NSEALPQQWDLMRRKVEDV 118

Query: 121  QRQLPPGAGASIVNDDFSDVYALFYAVTGEGFSDKQLQDYVDTLRRELVLVPGVAKAATL 180
            + +LP  A  SIV D+FS+VY + +AV G+     +L+D+   L+R +  V GV K    
Sbjct: 119  KLELPVQAQISIVQDEFSEVYGMLFAVYGDNMEMAELKDHARELQRRIKAVDGVKKVQLH 178

Query: 181  AEQQEAIFIEMSSERMAEFGLSVERVLQVLQKQSLVTVAGSVDAQQMRIPVIPKSNISSL 240
               ++ + I +S ER+AE  L++ ++++ L  Q++  VAG  D     + V       S+
Sbjct: 179  GINEQVVNIRISEERLAEANLTMLQLIEQLHSQNMPIVAGDFDLGIENLRVEQGDTFKSI 238

Query: 241  ADLTNLQVAVGSN---NAVVRLGDIANISRGYTEPASMLMRYNGQRAIGFGISNVTGGNV 297
             D+ NL +  G N   +AV+RLGDIA+++  Y +PAS L RYNGQ+AI   +S V G NV
Sbjct: 239  EDIRNLSIQTGLNGLQSAVIRLGDIADVTMAYQDPASTLSRYNGQQAITLAVSPVNGINV 298

Query: 298  VEMGDAVKARLAELESQRPLGMDLHVISMQSDSVRASVANFIDNLIAAVAIVFVVLLLFM 357
            V +GD +KA LA+ +++ P G  + VI+ Q + V+ SV NFI NLI +V IV VVLL+FM
Sbjct: 299  VSIGDTLKAVLADYQAKLPDGAGIGVIAYQPEEVQKSVNNFIVNLIESVVIVVVVLLIFM 358

Query: 358  GVRSGVIIGFVLLLTVAGTLCVMLIDDIAMQRISLGALIIALGMLVDNAIVVTDGVLVRF 417
            G RS  I+G  LLLT+  TL  M +  + +QR+SLG+ ++ALGMLVDNAIV+ D    + 
Sbjct: 359  GWRSAAIVGVSLLLTILFTLIYMNLTSVDLQRVSLGSFVLALGMLVDNAIVIVDLFQAKI 418

Query: 418  QQEPNADKQQVVSEVVNATKWPLLGGTVVGIFAFSAIGLSPSDMGEYAGSLFWVILYSMF 477
            +Q    ++ Q V + +     PLLG TV+     + + LS +D  E++ S+  V+  S+ 
Sbjct: 419  KQ--GIERTQAVIDSIKEMAMPLLGATVIAAMGTAPVLLSQTDSAEFSLSIVQVLCSSLL 476

Query: 478  LSWVFAVTVTPMLCHDFL--RVKAPTKEAK-PSKLVTGYKAVLQWVLSHR----VVSCAM 530
            LSW+ A+ VTP++C  FL    +   + AK PS+    Y+  ++WV+ +     + +  +
Sbjct: 477  LSWIIAMVVTPLMCWYFLGKTSEVDAENAKPPSRYTLMYQQAVEWVVENPKKTILFTVPL 536

Query: 531  LLGTLVAAVWGAQFIPPGFMPESQRPQFVVDVYLPQGSDIRRTEQVVASIEKDVTQKDGI 590
            LLGTL+     A  +   FMP S R    +D +LP G  I +T   +  +E  +  +  +
Sbjct: 537  LLGTLLV----APLLKVNFMPSSDRAIVFLDYWLPNGGRIEQTSTDMRKVEHWLLAQPEV 592

Query: 591  TNITSFIGGGGLRFMLTYSPEARNPSYGQLLIDIDDYTKIAPLVGELQNELDAKYPDASI 650
             +I+S++G    RF +T  PE  + SYGQ+LI++  +  I  LV      L  ++P A  
Sbjct: 593  ASISSYVGESAPRFSVTVEPEPLDASYGQILINMRSFDDIDTLVQRGDAWLAKEFPYAEP 652

Query: 651  KVWKFMLGRGGGKKIEAGFKGPDSHVLRQLAEQAKAIMHNDPNLIAVQDDWRQQVPVLQP 710
            +  +  L       IEA F G D  VL  LA QAK IM   PNL  V+DDWRQ+  V+ P
Sbjct: 653  RFRELKLATKDKYSIEARFIGQDPKVLHSLANQAKDIMRQHPNLKYVRDDWRQESKVMTP 712

Query: 711  VYSAQEAQRLGLTTQEISAAIAQTLNGRNVGVYREGNDLIPLMVRAPENERHHERAIENS 770
                  A+  G+T  +I+ AI +   G +VG  R G+DLIP+ +R+ +    H    E+ 
Sbjct: 713  QVDMHAARLAGVTRTDIANAINRVTEGTHVGTMRHGDDLIPIKLRSADASLEH---FEHI 769

Query: 771  EVFSAQAGRYIPVSQLVDSVDTVYQDALLRRINRMPTILVQADPAPGVMTADAFNNVREK 830
             V S      +P+ Q+V+S++   +++++ R NR+P I  QA      ++ D  +NVR+ 
Sbjct: 770  PVRSLLGTHSVPMGQVVESIEIKGEESMVWRRNRLPAITAQAG-----VSGDTASNVRQS 824

Query: 831  ----IEQIELPAGYELIWYGEYKASKDANEGLALSAPYGFAAMILAVVFMFNALRQPLVI 886
                IE I LP GY + W GEY   + + + L    P     M++ +V MFNA RQPL+I
Sbjct: 825  IAADIEAIALPDGYRMEWGGEYYDEQRSIDDLMQQNPKATLLMVIILVAMFNAFRQPLII 884

Query: 887  WMTAPFAVVGVTIGLIAFQTPFEFMAILGFLSLIGMMVKNAIVLVDQADAEIRAGKEAYF 946
             +T P A +G+   L+    PF FMAI+G + L GM++KN IVL+DQ + E R G+    
Sbjct: 885  MITLPLAAIGIVWSLLLLDKPFGFMAIVGMICLSGMIIKNGIVLMDQIELERRNGRRIAE 944

Query: 947  AIIDAAVSRARPVLLGAFTTILGVAPLLVDPFFKSMAVTIMFGLLFATILTLVVIPLFYA 1006
            AI  A ++R   + + A TT LG+ PLL D  F  MA TI+ GL  A++L+L V+P  Y 
Sbjct: 945  AIKAATLNRTMAISMAALTTALGMIPLLTDRLFDQMAATIIGGLTAASVLSLFVMPALYR 1004

Query: 1007 VLFR 1010
            + +R
Sbjct: 1005 LFYR 1008