Pairwise Alignments

Query, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 373 a.a., acriflavin resistance protein from Sinorhizobium meliloti 1021

 Score = 99.4 bits (246), Expect = 1e-25
 Identities = 104/371 (28%), Positives = 169/371 (45%), Gaps = 42/371 (11%)

Query: 16  LSAVIASAL---------LLAGCGEAPQISAPAPVVKPALTEIVASQRASDLTFNGVVRA 66
           +S V+A+AL         ++AG   A Q   P P V  A   I+  + + DLT  G V A
Sbjct: 3   VSRVLAAALSCGLLTTIGIVAGNAYAQQ---PPPAVNVAPAAIMDLRESVDLT--GKVVA 57

Query: 67  AQRADLAFRISGRLTDIAVKEGDQVKKGQLL---------ASLDSRDAKTALEAAQLELK 117
            Q+ D+  R+SG L  +  ++G +V  G +L         A+L   D   A   AQ +L 
Sbjct: 58  VQKVDIRARVSGFLEKVNFEDGQKVSAGTVLYQVEDGAYRAALQEIDGSIAAAEAQRDLA 117

Query: 118 NTEQEYRRAKAIFEKTQAISKAELDKVTNRYDLA-------KNRVEEAKRKLEYTQITAP 170
             E++  RA+ +   T  +++A LD    +   A       K   + A+  L YT+I AP
Sbjct: 118 VLERD--RAQRLIA-TNTVAQATLDTANAQVKKAEADILRLKGSKQNAELNLSYTKILAP 174

Query: 171 FDGVISEKTIENFAQVQANQVIMI-LQDLNDLEVAIEIPHRVMLSGVRNTRAIAELSAIP 229
           FDGV+   T++  A V  +   ++ L  L+ + V   +   +  S  R      E+S+  
Sbjct: 175 FDGVVGLTTVDVGALVAPDSGSLVTLTRLDPIYVEFPVATSLYFS-YRERVEKGEMSSGA 233

Query: 230 NQQFDLKLRT-YSTQPSSDSQTYSVVLGFEDLKGFRVMPG-----MSAKVIPVADKPADE 283
           N    L   T Y  + + D    +V  G + +      P      +   ++ V  + +D 
Sbjct: 234 NVSITLPNGTDYPEKGTIDFVASTVSQGTDTVTVRAEFPNPGGTLLDGTLVRVVLEQSDP 293

Query: 284 NTLITLPLTALVPDNQGKQFVWVVNAQNQAEKRYVDIGTTYKDRVVITQHLKPGEQVIIA 343
             ++ +P  A+  D QG  FV VV+A ++ E R VD+  + + + V+ + LK GE VI  
Sbjct: 294 QDVLAVPQQAVQRDQQGA-FVMVVDANSKVELRRVDVSRSSRGQAVVAKGLKEGENVITE 352

Query: 344 GVSSVREGMTV 354
           GV  VR G+ V
Sbjct: 353 GVGKVRPGIVV 363