Pairwise Alignments

Query, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., efflux transporter, RND family, MFP subunit from Marinobacter adhaerens HP15

 Score =  112 bits (281), Expect = 1e-29
 Identities = 102/368 (27%), Positives = 167/368 (45%), Gaps = 43/368 (11%)

Query: 20  IASALLLAGCGEAPQISAPAPVVKPALTEIVASQRASDLTFNGVVRAAQRADLAFRISGR 79
           + + LLLAGC E  +    +PV    +  + AS+      F     A+ +AD+  RI   
Sbjct: 14  VCAGLLLAGCSEPQEPKQTSPVAVSVVV-LEASEIRPSREFVARTAASAKADITPRIEAE 72

Query: 80  LTDIAVKEGDQVKKGQLL-------ASLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEK 132
           + +I   EG +V +G+LL       AS D + A   L AA+ E+ +  +  +R + + EK
Sbjct: 73  IREILFTEGAKVSQGELLIRLEDTRASADLQQADAELAAARAEVDSASRNLKRGEEVSEK 132

Query: 133 TQAISKAELDKVTNRYDLAKNR-------VEEAKRKLEYTQITAPFDGVISEKTIENFAQ 185
              +S A+LDK+ +R+  A++R       V++A   LEY +I APFDG I     +  A 
Sbjct: 133 G-FLSAADLDKLKDRFSAAESRLQAAQAAVQKAGSNLEYAEIRAPFDGWIGRLNYDVGAV 191

Query: 186 VQANQ-VIMILQDLNDLEVAIEIPHRVMLSGVRNTRAIAELSAIPNQQFDLKLRTYSTQP 244
           V  +   I  +Q  + + V  +I     ++  R     A       Q     L  Y T P
Sbjct: 192 VSPSSGAITSIQVTDPVYVEFQINEADFINFRRRGAESA-------QALSRSLGLYLTLP 244

Query: 245 SSDSQTYSVVLGFEDLKGFR---------VMPGMSAKVIP-------VADKPADENTLIT 288
             +    + VL F D++            V P   A ++P       V  +  +   L+ 
Sbjct: 245 DGERYEQAGVLDFADVQTDASTGTVAMRAVFPNPDAVLVPGLYVTLRVEGQSGEPQVLV- 303

Query: 289 LPLTALVPDNQGKQFVWVVNAQNQAEKRYVDIGTTYKDRVVITQHLKPGEQVIIAGVSSV 348
            P  A+    +GK FV VV+ QNQ  + ++  G+     +V+   L+ G++VI+ G+  V
Sbjct: 304 -PQVAVQETIEGK-FVLVVDDQNQVAQHFIQTGSREGALLVVNSGLEAGDRVIVEGLQKV 361

Query: 349 REGMTVRP 356
           R G+TV P
Sbjct: 362 RPGVTVSP 369