Pairwise Alignments
Query, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056
Subject, 366 a.a., efflux transporter, RND family, MFP subunit from Marinobacter adhaerens HP15
Score = 110 bits (275), Expect = 6e-29 Identities = 82/325 (25%), Positives = 153/325 (47%), Gaps = 10/325 (3%) Query: 34 QISAPAPVVKPALTEIVASQRASDLTFNGVVRAAQRADLAFRISGRLTDIAVKEGDQVKK 93 Q+S P P + + E + G V A +A + G + I + GD VK+ Sbjct: 35 QMSQPQPPAQISAVEAQNEAWTPAIKAVGSVEAINGIRVANEVPGVIEAINFESGDVVKQ 94 Query: 94 GQLLASLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEKTQAISKAELDKVTNRYDLAKN 153 G +L +D+ + AL + E + EQE++R + K +A+S+++ D+ +D A+ Sbjct: 95 GDVLIRIDAAIDEAALRTRRAEAQLAEQEFKRVSDLLPK-RAVSQSQYDEAKANFDAARA 153 Query: 154 RVEEAKRKLEYTQITAPFDGVISEKTIENFAQVQANQVIMILQDLNDLEVAIEIPHRVML 213 RV EA+ +L I APFDG + + ++ + I+ + L+ + V + + + Sbjct: 154 RVNEAEAQLSKKIIRAPFDGTLGIRMVDQGEYIATGTPIVEINMLDPIYVDYTLSEKNLP 213 Query: 214 SGVRNTRAIAELSAIPNQQFDLKLRTYSTQPSSDSQTYSVVLGFEDLKGFRVMPGMSAKV 273 + +A ++A+P Q F+ + +T + +++T V + + PGM A V Sbjct: 214 NVATGYPVVATVAAVPEQDFEGSVSAINTSVNPETRTVRVRATLSNPDNL-LRPGMFATV 272 Query: 274 IPVADKPADENTLITLPLTALVPDNQGKQFVWVVNAQNQ----AEKRYVDIGTTYKDRVV 329 + + ++N ++T+P TA+ + G FV+VV + +R V G T RV Sbjct: 273 L---TQQPEDNEVVTVPRTAISYNTYG-DFVFVVEENDDGNLVVNRRTVTTGETRNTRVA 328 Query: 330 ITQHLKPGEQVIIAGVSSVREGMTV 354 + L+ GE V+ G+ +R G V Sbjct: 329 VLSGLEAGETVVEKGLLRLRAGQKV 353