Pairwise Alignments

Query, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., efflux RND transporter periplasmic adaptor subunit from Lysobacter sp. OAE881

 Score =  118 bits (296), Expect = 2e-31
 Identities = 107/367 (29%), Positives = 169/367 (46%), Gaps = 25/367 (6%)

Query: 10  AAKRSLLSAVIASALLLAGCGEAPQIS-APAPVVKPALTEIVASQRASDLTFNGVVRAAQ 68
           A + S  + V  S  LL+ CG    +  AP PV+   +T  VA+   +   F G VRA +
Sbjct: 8   AFRLSAWTLVAFSTFLLSACGRDGAVEEAPRPVL---VTHPVAADHTAS-AFAGDVRARE 63

Query: 69  RADLAFRISGRLTDIAVKEGDQVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYRRAK- 127
            + L+FR+ G+L    V  GD V+ GQ+LA LD  D +    AA+ +L   E E  RA+ 
Sbjct: 64  ESPLSFRVGGKLVQRNVDVGDHVRAGQVLAMLDPGDLEAQARAAKAQLAAAEAELGRARA 123

Query: 128 -----AIFEKTQAISKAELD-------KVTNRYDLAKNRVEEAKRKLEYTQITAPFDGVI 175
                A     Q +S++ LD           + + A+  VE A  +  Y+Q+ A  DGVI
Sbjct: 124 DQARFAKLANEQLVSRSTLDAQNAAATAAQGQVNAARAEVEVASNQAAYSQLRATRDGVI 183

Query: 176 SEKTIENFAQVQANQVIMILQDLNDLEVAIEIPHRVMLSGVRNTRAIAELSAIPNQQFDL 235
           + +  E    V A Q +  L      EVA  +P  +            E  + P Q+++ 
Sbjct: 184 AARQAEAGQVVAAGQSVFTLAADGVREVAFALPETMAGKVKAGQPVQVEAWSRPGQRWNG 243

Query: 236 KLRTYSTQPSSDSQTYSVVLGFEDLKGFRVMPGMSAKVIPVADKPADENTLITLPLTALV 295
           ++R  S      S+T++  +  +   G  +  G SA+V      P D+   +++P+ AL 
Sbjct: 244 RIREISPAADPASRTFAARVTVDAPAG-AIDLGQSARVY----LPTDDRGGLSVPIAALQ 298

Query: 296 PDNQGKQFVWVVNAQNQAEK-RYVDIGTTYKDRVVITQHLKPGEQVIIAGVSSVREGMTV 354
            +N GK  V+VV+ +    K R V  G   +DRV +   L   E ++ AG   +R+G  V
Sbjct: 299 REN-GKASVFVVDMKTSTVKLRPVQAGAFGEDRVPVQGELAANEWIVAAGGHLLRDGQKV 357

Query: 355 RPYTDNN 361
           +P    N
Sbjct: 358 QPVDREN 364