Pairwise Alignments

Query, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 361 a.a., membrane protein from Klebsiella michiganensis M5al

 Score =  138 bits (348), Expect = 2e-37
 Identities = 107/361 (29%), Positives = 184/361 (50%), Gaps = 18/361 (4%)

Query: 14  SLLSAVIASALLLAGCG-EAPQISAPAPVVKPALTEIVASQRASDLTFNGVVRAAQRADL 72
           SL+  VI   L+   C  +APQI+    +VK A  E+VA   +    F   + +    DL
Sbjct: 6   SLIPLVI---LITTACDRKAPQITPLPRMVKVA--EVVAIGDSQQRVFPARIESGDSTDL 60

Query: 73  AFRISGRLTDIAVKEGDQVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEK 132
           +F+  G++  + V++G  + +GQ LA L +R+A+  +   Q      ++++ R + +  +
Sbjct: 61  SFKRGGQIESLDVRQGAAITQGQPLARLSAREAQQRVNERQTAATLAQRQFDRFQTLAGR 120

Query: 133 TQAISKAELDKVTNRYDLAKNRVEEAKRKLEYTQITAPFDGVISEKTIENFAQVQANQVI 192
            QAISKAE+D      D A   ++ A+ +L    +TAPF GV +   + N   V A Q I
Sbjct: 121 -QAISKAEMDIQRANRDAANAALKIAREELSQMTLTAPFSGVAAYVPVRNHQVVAAGQPI 179

Query: 193 MILQDLNDLEVAIEIPHRVMLS-GVRNT--RAIAELSAIPNQQFDLKLRTYSTQPSSDSQ 249
           + L   + L+V   +P  +  +  +RN   R + +++A+P++QF  + + ++    S + 
Sbjct: 180 VTLTRTDLLDVVFSVPENLFTALDIRNAQYRPVVKINAMPDRQFTAEYKEHTGSSDSSTL 239

Query: 250 TYSVVLGFEDLKGFRVMPGMSAKV-IPVADKPADE-NTLITLPLTALV-PDNQGKQ--FV 304
           T+ ++L       F  + G+S  V I +A+ PA      + +P+ A+  PDN+ +    V
Sbjct: 240 TWQIILTMPRPADFPAVGGVSGTVTINLANLPASAGKNAVVVPVEAVFNPDNRPRNDPHV 299

Query: 305 WVVNA---QNQAEKRYVDIGTTYKDRVVITQHLKPGEQVIIAGVSSVREGMTVRPYTDNN 361
           WVV     Q + E+R V +G      VVIT+ L  GE+V+ AGVS +     VR +T   
Sbjct: 300 WVVQGSGDQLKLEERQVGVGQVTSQGVVITEGLSVGERVVAAGVSELHAQQPVRIWTRER 359

Query: 362 G 362
           G
Sbjct: 360 G 360