Pairwise Alignments

Query, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., RND family efflux transporter MFP subunit from Klebsiella michiganensis M5al

 Score = 94.7 bits (234), Expect = 4e-24
 Identities = 96/357 (26%), Positives = 159/357 (44%), Gaps = 24/357 (6%)

Query: 14  SLLSAVIASALL--LAGCGEAPQISAPAPVVKPALTEIVASQRASDLTFNGVVRAAQRAD 71
           +LL  ++ + ++  L GCG+      PAP        I +      L   G + A     
Sbjct: 27  ALLPPIVLALMIVPLVGCGDKSG-DKPAPARPVRYVVIGSPATLPSLERTGEIHAHDETA 85

Query: 72  LAFRISGRLTDIAVKEGDQVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYRRAKAIFE 131
           L+FR +GR+   AV  GD+V  GQLLA+LD   A+  L++A  + ++     R A     
Sbjct: 86  LSFRTAGRMMTRAVDIGDRVNYGQLLATLDDTSAQNQLDSATADEESARATARVAALNVS 145

Query: 132 KTQ------AISKAELDKVTNRYDLAKNRVE-------EAKRKLEYTQITAPFDGVISEK 178
           + Q      AI++++LD     + +A  RV+        A+  L +T++T+P +G+I+  
Sbjct: 146 RMQKLIATGAIARSQLDSARADWLVASARVKSSEAALRNARESLGWTRLTSPGEGIITAV 205

Query: 179 TIENFAQVQANQVIMILQDLNDLEVAIEIPHRVMLSGVRNTR-AIAELSAIPNQQFDLKL 237
           +      V A + ++ L      +V  +IP    +   R     +A LS      F + L
Sbjct: 206 SASPGQVVNAGETVVTLAAGQARDVVFDIPDPAKVEAQRAEEFQVALLSDAGVNAFAI-L 264

Query: 238 RTYSTQPSSDSQTYSVVLGFEDLKGFRVMPGMSAKVIPVADKPADENTLITLPLTALVPD 297
           R  S Q    ++T+ V    +       + G S  V      P+  +    +P +AL   
Sbjct: 265 RDISPQADPQTRTWRVRATLKKPPAAMAL-GSSVTV----RLPSSGSAGYAVPASALSRC 319

Query: 298 NQGKQFVWVVNAQNQAEKRYVDIGTTYKDRVVITQHLKPGEQVIIAGVSSVREGMTV 354
            + K  V+V+  Q QA+ R V   +     V+I   L PG++VI AGVS +R G  V
Sbjct: 320 GE-KPAVFVITPQMQAQLRVVVPASYTASSVIIASGLMPGDRVITAGVSKLRPGEKV 375