Pairwise Alignments

Query, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., Multidrug resistance protein MdtA from Enterobacter sp. TBS_079

 Score =  108 bits (270), Expect = 2e-28
 Identities = 90/343 (26%), Positives = 161/343 (46%), Gaps = 27/343 (7%)

Query: 33  PQISAPAPVVKPALTEIVASQRASDLTFNGVVRAAQRADLAFRISGRLTDIAVKEGDQVK 92
           P  +A  PV    +  +  +  A++    G + A    ++  R  G +T +  ++G  VK
Sbjct: 15  PAFAAAIPV---RVAVVEQTPHAAERHVPGRIEAIHTVEIRARTEGVITQVHFRDGQYVK 71

Query: 93  KGQLLASLDSRDAKTALEAAQLELKNTEQEYRRAK---AIFE---KTQAISKAELDKVTN 146
           KG +L  LD  + + A+  AQ E+K+ E   R+A+   + FE    + AIS+ ++D    
Sbjct: 72  KGDVLFELDDAEPRAAVRLAQAEVKSAEATLRQAQQQLSRFESLGNSNAISRHDVDNARM 131

Query: 147 RYDLAKNRVEEAKRKLE-------YTQITAPFDGVISEKTIENFAQVQANQVIMI-LQDL 198
           + D+A   +E+AK +LE       YT+IT+P DG +        + V  +  +++ +  L
Sbjct: 132 QRDVASAALEQAKARLETRNVTLAYTRITSPIDGRVGHSQFHAGSLVNPSSGVLVDVVQL 191

Query: 199 NDLEVAIEIPHRVMLSGVRNTRAIAELSAIPNQQFDLKLRTYSTQPSS-----DSQTYSV 253
           + + +A  +      +       I+ L      + D   +  S + +S     D +T SV
Sbjct: 192 DPIRIAFALEEGAFATKAGQHADISALKRAWQARIDSNGQRLSGELTSVDNRIDPRTASV 251

Query: 254 VLGFEDLK-GFRVMPGMSAKVIPVADKPADENTLITLPLTALVPDNQGKQFVWVVNAQNQ 312
           +L  E      +++PG +  V     +PA    ++T+P  A+  + +G  F WVVNA+ +
Sbjct: 252 MLRAEFANPRHQLLPGGNVNVYL---RPASAQPVLTVPAAAVQQNGEG-FFAWVVNAEGK 307

Query: 313 AEKRYVDIGTTYKDRVVITQHLKPGEQVIIAGVSSVREGMTVR 355
           AEKR + I      +  I+  L PGE+ I  G   V+ G  V+
Sbjct: 308 AEKRPLKIAGQIGQQFEISSGLHPGERAITDGAQRVQPGAAVQ 350