Pairwise Alignments

Query, 434 a.a., paraquat-inducible protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., PqiA family integral membrane protein (RefSeq) from Shewanella sp. ANA-3

 Score =  388 bits (997), Expect = e-112
 Identities = 204/416 (49%), Positives = 272/416 (65%), Gaps = 10/416 (2%)

Query: 10  LIGCDECGLITNVPLLSQAQTAQCPRCGHTLTQTPQKPYQTAVALTISCLILLVLSLTFP 69
           L  C+ECGL+T          A CPRC H L      P+Q   A   + LI+L LSL FP
Sbjct: 13  LQACEECGLVTPYTEPKPGYRAHCPRCQHGLQSVLATPFQPIWAYGAATLIMLGLSLGFP 72

Query: 70  FMSFSVQGMTQEITLLNAAKMLGEFQNVLLAILLFTTVILFPALYITILLFVSFKAAQST 129
           F+SFSVQG++Q+ +L +A   +    N LLA+++   V++ P +YI+  + +  +A    
Sbjct: 73  FLSFSVQGLSQKASLWSALISMHYASNSLLALVILLCVVILPLIYISFSMLIYRQAYLVQ 132

Query: 130 Q-RQLSSSEIQRAKLLCKTLLTVQPWLMVDVFLIGVLVSLIKIASLAEVAMGYSFWAFCF 188
           Q R +  S ++RA    K +   + WLM DVFL+G+LV+++KI SLAEV  G SFWAFC 
Sbjct: 133 QGRTIELSWLKRAS---KWVFRFESWLMADVFLVGILVAMVKILSLAEVGFGPSFWAFCI 189

Query: 189 FAMLVVKTVSLVDRYWLWQHFIPAQTPQGVNAGQTHCTHNSVSCHTCQQINLLRPDQKKP 248
           + +L+VK VSLVD  W+W    P      V+ G++H   N   C  C Q+N +   +   
Sbjct: 190 YTLLLVKFVSLVDSSWVWDKLTPRVATPYVSVGESHLQQNHGVCPICGQLNAIDATE--- 246

Query: 249 TCLRCGSRLHAYHPQLNLQWAWALLLAAIIFYIPANLYPMMYTVSLGKSEGSSIMQGVIL 308
            C RC   +H Y P  ++Q AWA LLAA +FYIPAN YP+MYT S+G++E S+I+ GV+L
Sbjct: 247 -CSRCAGAVHKYLPANSMQAAWAFLLAATVFYIPANFYPIMYTTSVGQTEASTIISGVVL 305

Query: 309 LWHLGSYPVAMVIFLASIFIPMAKMFALGWLYWQAGKLNVFPEQQNLKRLKVYRVTEFIG 368
           LWHLGSYPVA +IF ASI IP AK+ +L +L+ QAGK +     Q +K  ++YRVTEFIG
Sbjct: 306 LWHLGSYPVASIIFFASIVIPTAKIASLAYLFRQAGKAH--SSDQAIKNQQLYRVTEFIG 363

Query: 369 RWSMIDIFVVAILVSLVQLHNLMAIYPGPAALSFAAVVLLTMLSAMVFDSRILWHE 424
           RWSMIDIFVVA+L +LVQL  LMAI PGPAALSFA VV+LTMLSA+ FDSR+LW +
Sbjct: 364 RWSMIDIFVVALLTALVQLDELMAIKPGPAALSFAMVVILTMLSAIAFDSRVLWRQ 419