Pairwise Alignments

Query, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., mechanosensitive ion channel (RefSeq) from Shewanella amazonensis SB2B

 Score =  429 bits (1103), Expect = e-124
 Identities = 219/510 (42%), Positives = 333/510 (65%), Gaps = 3/510 (0%)

Query: 45  ELENEIDQIKQYISELSVTLKQATGDVRDALQLQLFQKNAELRKSLSKAVEEKTIAKEKL 104
           E  + ++Q++  I++    L QA G++    + ++ QK AELR+ ++  +E        L
Sbjct: 36  EFRSNVEQLEHTIAQDLKALSQAKGELVAISEYRINQKTAELRQLINAEIEAPNTDTAYL 95

Query: 105 VELVNIQQRYTEEANHYISERLNSLDDSLGKASHEEKLSYITTYRELQQYLDVTYHSSAE 164
             LV  Q  + ++   Y+ + +  L ++LG ++  E L  ++  RE ++  D  +    +
Sbjct: 96  QTLVENQLSFIQQTQAYLGKDIQRLKNALGSSNDAELLLALSN-RERER--DTNFKKELQ 152

Query: 165 NIGWLSSLDIDTRDVEKTLRERINQRLRLLSASLEYLKQQISVINNQIKSSPESEKANLQ 224
            + W S L +DT+     L++ + +R   L++ + Y ++Q+    ++ +++ +   A   
Sbjct: 153 TLDWGSKLGMDTQPRRTELKQALAERADRLASLVSYTQEQLKQAVDEARTAGKDVSAEQT 212

Query: 225 LALLFTQQRLDIVTKSLRSVVGIADQFEIETADYKRQIFQVTGSITQDLLNTQVVFSIVR 284
             +   + RL+  + SL +VVG+ ++   +T   K+ +F V+G ITQD+L+  +V S++ 
Sbjct: 213 ARVSELKARLEQNSVSLSTVVGLLEELGADTTALKQVLFTVSGDITQDVLDIDLVGSLLG 272

Query: 285 HWSNSLVNWLASNAVQHLFQLFIFLLILLAAKGGAKVTRTVVRSAVNSKNIRISHLMQDF 344
            W +   +    N  + LF++FIFLLIL  A   AK+ ++VV+ AV++  ++ S L+QDF
Sbjct: 273 KWLSVAESQAIENGPRMLFKVFIFLLILFVASLVAKLVKSVVKKAVSNSKLKFSKLLQDF 332

Query: 345 FVSMSGKVVWVIGILVGLSQIGLNLAPVLTGFGIAGVIIGFALQDTLSNFAAGMMLLIYR 404
           FVS+S K V+ +G+L+ LSQ+G  L P+L GFGIAGVIIGFALQDTLSNFA+GMM+LIYR
Sbjct: 333 FVSLSAKGVYTLGLLIALSQLGFELGPLLAGFGIAGVIIGFALQDTLSNFASGMMILIYR 392

Query: 405 PFDVGDFVHAGGVDGKVSHMSLVNTTIRTFDNQIIIVPNSKIWGDVIKNVTHERIRRVDM 464
           P+DVGD + A GV G+VSHMSLV+TTI+T DNQ +I+PN+KIWGD I N+T E  RRVDM
Sbjct: 393 PYDVGDLISAAGVTGRVSHMSLVSTTIKTLDNQRLIIPNNKIWGDTINNITAEHHRRVDM 452

Query: 465 VFGIGYSDDLLKAEAVLTDIVKSHPAVLKTPEPNIKVHTLNTSSIDFIVRPWVKTDDYWD 524
            FGI Y+D++  AE +L DIV SHP VLK P   +++H L  SS+DF+VRPWV+ DDYW+
Sbjct: 453 TFGISYADNVEHAEKILLDIVNSHPKVLKDPGVTVRLHLLGESSVDFVVRPWVRPDDYWE 512

Query: 525 VYWDVTKEVKLRFDREGISIPFPQQDVHLH 554
           VYWDVTK VK RFD EGI+IPFPQ+DVH +
Sbjct: 513 VYWDVTKAVKQRFDAEGITIPFPQRDVHFY 542