Pairwise Alignments

Query, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

Subject, 282 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 97.4 bits (241), Expect = 6e-25
 Identities = 70/286 (24%), Positives = 131/286 (45%), Gaps = 17/286 (5%)

Query: 269 ITQDLLNTQVVFSIVRHWSNSLVNWLASNAVQHLFQLFIFLLIL-LAAKGGAKVTRTVVR 327
           + Q+L   Q V+ ++         +L   + Q +  L IFLL L LAAK    V + +  
Sbjct: 10  LQQELAQLQNVYDLI-------TEFLVQYSFQLIGALLIFLLGLWLAAKVAGMVNKQL-- 60

Query: 328 SAVNSKNIRISHLMQDFFVSMSGKVVWVIGILVGLSQIGLNLAPVLTGFGIAGVIIGFAL 387
                +  R+   +  F   +   ++ ++  +V L ++G+++ P++   G A +  G A+
Sbjct: 61  -----EKYRVDITLASFVTHLVRILIIIMVAIVALGKLGISVTPMVAAIGAASLGAGLAI 115

Query: 388 QDTLSNFAAGMMLLIYRPFDVGDFVHAGGVDGKVSHMSLVNTTIRTFDNQIIIVPNSKIW 447
           Q  LSN+AAG+ +++ RPF VG+ +   GV G V  + L  T +   + + I +PN  I 
Sbjct: 116 QGMLSNYAAGITIIVTRPFAVGNTISVRGVTGVVKDILLGMTILTNEEGEQISIPNKHIV 175

Query: 448 GDVIKNVTHERIRRVDMVFGIGYSDDLLKAEAVLTDIVKSHPAVLKTPEPNIKVHTLNTS 507
           G+++ N    ++  V+  F I Y  D     A++   +     +     P + ++  N  
Sbjct: 176 GEILHNSFEYKL--VESQFNICYDQDADAVIALVNKALLGSGKLHAEQPPQVGINGFNNL 233

Query: 508 SIDFIVRPWVKTDDYWDVYWDVTKEVKLRFDREGISIPFPQQDVHL 553
            I+  +R W+ T  Y+   +   + +        I IP   +D HL
Sbjct: 234 GIEIGLRYWLPTQSYFQDKYITHQAIHGALKAAAIKIPSLSRDAHL 279