Pairwise Alignments

Query, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

Subject, 868 a.a., MscS Mechanosensitive ion channel (NCBI) from Rhodospirillum rubrum S1H

 Score =  100 bits (250), Expect = 2e-25
 Identities = 63/252 (25%), Positives = 126/252 (50%), Gaps = 3/252 (1%)

Query: 302 LFQLFIFLLILLAAKGGAKVTRTVVRSAVNSKNIRISHLMQDFFVSMSGKVVWVIGILVG 361
           +  + + +L+ L A    +V +  ++  V S+   +   ++    ++ G +  V    + 
Sbjct: 565 IVDIAVGILVFLVAMAITRVAQGTLQRKVLSQT-GMDAGVRHSLTAVLGYIGLVAAAALA 623

Query: 362 LSQIGLNLAPVLTGFGIAGVIIGFALQDTLSNFAAGMMLLIYRPFDVGDFVHAGGVDGKV 421
           +  +G++L  +    G   V IGF LQ+ ++NF +G+++L+ RP  VGD+V  G  +G V
Sbjct: 624 VGTMGIDLTNIALIAGALSVGIGFGLQNIVNNFVSGLIILVERPVKVGDWVIIGSHEGLV 683

Query: 422 SHMSLVNTTIRTFDNQIIIVPNSKIWGDVIKNVT-HERIRRVDMVFGIGYSDDLLKAEAV 480
             +S   T + TF    +++PN++I      N+T   R+ R+D+   +  + D  K   +
Sbjct: 684 KRISFRATELETFTQASVVIPNAEILSSPFTNLTLRNRLGRIDVSVLVIMNSDTRKVRDL 743

Query: 481 LTDIVKSHPAVLKTPEPNIKVHTLNTSSIDFIVRPWV-KTDDYWDVYWDVTKEVKLRFDR 539
           L +I ++HP VL  P P + +     + ++F VR +     +   +  D+  E+  RF  
Sbjct: 744 LLEIARAHPQVLTLPAPWVVLKAFADTGLEFEVRSYTSNVMNRGTIASDMRLEIDRRFRE 803

Query: 540 EGISIPFPQQDV 551
           EG+ +P P + +
Sbjct: 804 EGVIMPAPLRPI 815