Pairwise Alignments

Query, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

Subject, 268 a.a., small-conductance mechanosensitive channel from Phaeobacter inhibens DSM 17395

 Score =  157 bits (398), Expect = 4e-43
 Identities = 87/239 (36%), Positives = 133/239 (55%), Gaps = 1/239 (0%)

Query: 309 LLILLAAKGGAKVTRTVVRSAVNSKNIRISHLMQDFFVSMSGKVVWVIGILVGLSQIGLN 368
           L++L+     A V    VR  +N+    +   + +F  S    V+  I ++  L   G+ 
Sbjct: 22  LVVLVVGWIAAGVISGAVRRRINATP-HLDQTLGNFAASAVRWVLLAIVLVAVLGIFGIE 80

Query: 369 LAPVLTGFGIAGVIIGFALQDTLSNFAAGMMLLIYRPFDVGDFVHAGGVDGKVSHMSLVN 428
              ++   G A + IG ALQ TLS+ AAG+ML+++RP+ +G +V  GG  G V  ++L  
Sbjct: 81  ATSLVAMLGAATLAIGLALQGTLSDLAAGVMLVMFRPYKLGQYVDIGGTSGTVVDLNLFV 140

Query: 429 TTIRTFDNQIIIVPNSKIWGDVIKNVTHERIRRVDMVFGIGYSDDLLKAEAVLTDIVKSH 488
           T + T DN  II+PN + WG +I N +    RRVDMVFGI Y D    A+ ++ D+  + 
Sbjct: 141 TELVTPDNVQIIIPNGQAWGAIITNYSAHDTRRVDMVFGIDYGDSADAAKEIILDLANAD 200

Query: 489 PAVLKTPEPNIKVHTLNTSSIDFIVRPWVKTDDYWDVYWDVTKEVKLRFDREGISIPFP 547
             V+  P P ++V  L  SS+D   R W K  DYW++ + +T+ VK  FD +GISIP+P
Sbjct: 201 ARVMADPAPWVRVTNLGDSSVDLTARLWCKAADYWELKFAMTQAVKEAFDDKGISIPYP 259