Pairwise Alignments

Query, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., putative small-conductance mechanosensitive channel from Phaeobacter inhibens DSM 17395

 Score =  161 bits (408), Expect = 3e-44
 Identities = 86/230 (37%), Positives = 131/230 (56%), Gaps = 7/230 (3%)

Query: 325 VVRSAVNSKNIRI--SHLMQD-----FFVSMSGKVVWVIGILVGLSQIGLNLAPVLTGFG 377
           +V S V  + ++I  SH   D     F  +++  V+    +L  L+  G+    ++   G
Sbjct: 46  IVASWVKRRIVQIGDSHASLDVTLFHFLGNLARYVILAFAVLFVLNTFGVQTTSIIAAIG 105

Query: 378 IAGVIIGFALQDTLSNFAAGMMLLIYRPFDVGDFVHAGGVDGKVSHMSLVNTTIRTFDNQ 437
            AG+ IG A+Q  LSN AAG+ML+++RPF +GDF+      G V  ++L NT I +  N 
Sbjct: 106 AAGLAIGLAMQGALSNVAAGIMLILFRPFKLGDFIEVNDEMGTVKEITLNNTVIASLSNL 165

Query: 438 IIIVPNSKIWGDVIKNVTHERIRRVDMVFGIGYSDDLLKAEAVLTDIVKSHPAVLKTPEP 497
            +I+PNS++WG+ I N +    RR +  FG+GY  +L  AE V+ D + S       PEP
Sbjct: 166 KVIIPNSEVWGNTITNYSEFDTRRAEWNFGVGYGANLATAEQVIRDTIMSDSRSHAEPEP 225

Query: 498 NIKVHTLNTSSIDFIVRPWVKTDDYWDVYWDVTKEVKLRFDREGISIPFP 547
            I+V+ LN+SS+DF+VR WV   +Y+    D+ ++VK   D  GI IPFP
Sbjct: 226 FIQVNNLNSSSVDFLVRVWVDAAEYFQYQADMKRKVKEALDAAGIDIPFP 275