Pairwise Alignments

Query, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., putative mechanosensitive ion channel from Phaeobacter inhibens DSM 17395

 Score =  134 bits (338), Expect = 4e-36
 Identities = 86/285 (30%), Positives = 151/285 (52%), Gaps = 17/285 (5%)

Query: 268 SITQDLLNTQVVFSIVRHWSNSLVNWLASNAVQHLFQLFIFLLILLAAKGGAKVTRTVVR 327
           S+T+DL  T +           + +WLAS AV  L ++ + L ILL         +TV+R
Sbjct: 2   SVTEDLSMTLM---------EQMSDWLAS-AVIALPRVGVALTILLLTALLVWAAKTVIR 51

Query: 328 SAVNSKNIRISHLMQDFFVSMSGKVVWVIGILVGLSQIGLNLAP--VLTGFGIAGVIIGF 385
               S+ +++   + D    ++  ++W+IG L+ ++ +   + P   LT  G+  V IGF
Sbjct: 52  RI--SRQLKLRRNLCDVLQLLASVILWLIGSLIAVTVVFPTVTPGKALTTLGLGSVAIGF 109

Query: 386 ALQDTLSNFAAGMMLLIYRPFDVGDFVHAGGVDGKVSHMSLVNTTIRTFDNQIIIVPNSK 445
           A +DT  NF AG++LL+  PF +GDF+   G +GK+  +++ +T IR  D Q+++VPN++
Sbjct: 110 AFKDTFENFLAGILLLLREPFQIGDFIECEGAEGKIEAITVRDTHIRQTDGQLVVVPNAQ 169

Query: 446 IWGDVIKNVTHERIRRVDMVFGIGYSDDLLKAEAVLTDIVKSHPAVL-KTPEPNIKVHTL 504
           ++ + +   T+  +RR  ++ GI Y +++  A +V+++ V++   V     +  +   T 
Sbjct: 170 LFHNAVTVRTNRELRRATLICGIAYGENVDTARSVISEAVRNVDMVRDDVRDVQVFAKTF 229

Query: 505 NTSSIDFIVRPWVKTD--DYWDVYWDVTKEVKLRFDREGISIPFP 547
             SSIDF +  W  ++  D       V   VK   D  GI IPFP
Sbjct: 230 GASSIDFEITWWTGSEPLDIRASRDQVVAAVKTALDDAGIEIPFP 274