Pairwise Alignments

Query, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

Subject, 829 a.a., putative mechanosensitive ion channel protein from Phaeobacter inhibens DSM 17395

 Score =  138 bits (348), Expect = 8e-37
 Identities = 92/285 (32%), Positives = 141/285 (49%), Gaps = 5/285 (1%)

Query: 279 VFSIVRHWSNSLVNWLASNAVQHLFQLFIFLLILLAAKGGAKVTRTVVRSAVNSKNIRIS 338
           V  +   WSN L  +   +          F+ I     G  ++ +  +R+A+  K  RI 
Sbjct: 492 VADLTELWSNFLEGFQVGDTRISPTAFITFVAIFAVGYGLTRLVQGSLRNALLPKT-RID 550

Query: 339 HLMQDFFVSMSGKVVWVIGILVGLSQIGLNLAPVLTGFGIAGVIIGFALQDTLSNFAAGM 398
              Q+   S  G V   +  LV +S  GL+L+ +    G   V IGF LQ  +SNF +G+
Sbjct: 551 VGGQNAIASGMGYVGIFLAALVAVSMAGLDLSSLAIVAGALSVGIGFGLQTIVSNFVSGI 610

Query: 399 MLLIYRPFDVGDFVHAGGVDGKVSHMSLVNTTIRTFDNQIIIVPNSKIWGDVIKNVTH-E 457
           +LL+ RP   GD++  GG+ G V  +S+ +T I TFD   +IVPNS +    + N T   
Sbjct: 611 ILLVERPVSKGDWIEVGGLMGYVRDISVRSTRIETFDRTDVIVPNSDLITGTVTNYTRGN 670

Query: 458 RIRRVDMVFGIGYSDDLLKAEAVLTDIVKSHPAVLKTPEPNIKVHTLNTSSIDFIVRPWV 517
            + RV +  G+ Y  D  K EA+L ++ K+HP VL  P P++        S++F +R  +
Sbjct: 671 TVGRVIVPVGVSYGTDPRKVEAILMEVAKAHPMVLMNPPPSVVFQGFGADSLNFEIRA-I 729

Query: 518 KTDDYW--DVYWDVTKEVKLRFDREGISIPFPQQDVHLHLVDQKA 560
             D  W   V  D+  ++  RFD  GI IPF Q+D+ +   D  A
Sbjct: 730 LRDVNWVLSVKSDMNYDIARRFDEAGIEIPFAQRDIWIRNPDALA 774