Pairwise Alignments

Query, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

 Score = 84.7 bits (208), Expect = 4e-21
 Identities = 51/181 (28%), Positives = 89/181 (49%), Gaps = 4/181 (2%)

Query: 377 GIAGVIIGFALQDTLSNFAAGMMLLIYRPFDVGDFVHAGGVDGKVSHMSLVNTTIRTFDN 436
           G   + +GF  Q+ ++NF +G +L+  RP  +GDF+  G   G V  ++  +T IR  D 
Sbjct: 97  GAVAIGVGFGAQNIINNFISGWILMWERPIRIGDFLEIGETKGVVESINTRSTLIRRNDG 156

Query: 437 QIIIVPNSKIWGDVIKNVT-HERIRRVDMVFGIGYSDDLLKAEAVLTDIVKSHPAVLKTP 495
             ++VPNS++  + + N T  + I R  +  G+ Y  D+ +   ++   +  H  +L TP
Sbjct: 157 VHMLVPNSQLLENTVTNWTLIDNIARSTVRVGVAYGSDVERVADIIKQTLDEHEEILTTP 216

Query: 496 EPNIKVHTLNTSSIDFIVRPWVKTD---DYWDVYWDVTKEVKLRFDREGISIPFPQQDVH 552
            P         +++ F    WV  +   D   +  D+   +   F + GI I FPQ+D+H
Sbjct: 217 SPVAIFEDFGDNALIFDGIFWVCANTEADIRRIRSDIRFRIYKLFTQAGIVIAFPQRDLH 276

Query: 553 L 553
           L
Sbjct: 277 L 277