Pairwise Alignments

Query, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

 Score =  183 bits (464), Expect = 8e-51
 Identities = 85/250 (34%), Positives = 151/250 (60%), Gaps = 2/250 (0%)

Query: 304 QLFIFLLILLAAKGGAKVTRTVVRSAVNSKNIRISHLMQDFFVSMSGKVVWVIGILVGLS 363
           Q+   ++I +  K  A V + +    +N +  +I   +  F  +M+  +V+V  ++  L 
Sbjct: 21  QVVFAIIIFIIGKYLANVAKKLTTKLMNKR--KIDKTVVSFVANMAWALVFVFTVIATLG 78

Query: 364 QIGLNLAPVLTGFGIAGVIIGFALQDTLSNFAAGMMLLIYRPFDVGDFVHAGGVDGKVSH 423
           QIG+  A ++   G AG+ +G ALQ +LSNFA+G++++++RP  VGD++ A G+ G V  
Sbjct: 79  QIGVQTASLVAVIGAAGLAVGLALQGSLSNFASGVLMVLFRPCRVGDYIEAAGIAGTVDE 138

Query: 424 MSLVNTTIRTFDNQIIIVPNSKIWGDVIKNVTHERIRRVDMVFGIGYSDDLLKAEAVLTD 483
           +++ +T +RT DN++I+ PNS I    I N +    RR+D+V G+ Y  DL + + VL  
Sbjct: 139 ITIFSTKLRTPDNKVIVAPNSSIMNGTITNYSAMETRRIDLVIGVSYDADLKQTKEVLKQ 198

Query: 484 IVKSHPAVLKTPEPNIKVHTLNTSSIDFIVRPWVKTDDYWDVYWDVTKEVKLRFDREGIS 543
           ++ ++  +LK P   + +  L  SS++F+VRPWVK  DYW   +++ +++KL  D   I 
Sbjct: 199 VLDNNAYILKDPAYTVALTELADSSVNFVVRPWVKGSDYWPARFEILEQIKLALDENNIG 258

Query: 544 IPFPQQDVHL 553
           IP+PQ D+++
Sbjct: 259 IPYPQMDIYV 268