Pairwise Alignments

Query, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

Subject, 267 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

 Score =  185 bits (469), Expect = 2e-51
 Identities = 88/266 (33%), Positives = 153/266 (57%), Gaps = 3/266 (1%)

Query: 290 LVNWLASNAVQHLFQLFIFLLILLAAKGGAKVTRTVVRSAVNSKNIRISHLMQDFFVSMS 349
           L++ +  +   +L  +   +LIL+      K+  +++ +   +K  +I  L+ +F + + 
Sbjct: 2   LISLMGYSMSINLILILKAILILVLGYFAVKIVSSILENG--AKKSKIPELVSEFVIKLF 59

Query: 350 GKVVWVIGILVGLSQIGLNLAPVLTGFGIA-GVIIGFALQDTLSNFAAGMMLLIYRPFDV 408
             +++V  IL+ +   G+   P++ G   + G+I+GF LQDTL+N  +G+ + + +P D 
Sbjct: 60  SAILYVFVILLAVGVFGVETGPIILGLSASLGLILGFGLQDTLTNLTSGLWIAVMKPLDK 119

Query: 409 GDFVHAGGVDGKVSHMSLVNTTIRTFDNQIIIVPNSKIWGDVIKNVTHERIRRVDMVFGI 468
            + V  GG+ GK+  + ++ T + T DN +I +PN  +WG  I N T   +RRVD+  G+
Sbjct: 120 DETVQIGGITGKIVEVGIMATKLLTPDNVVITIPNKLVWGSPITNYTRMDLRRVDVAVGV 179

Query: 469 GYSDDLLKAEAVLTDIVKSHPAVLKTPEPNIKVHTLNTSSIDFIVRPWVKTDDYWDVYWD 528
            Y ++L  A +   +++  HP VLK P P + V  L  SS+D  +R W KT DYW V  D
Sbjct: 180 SYGENLDNALSKALELISEHPKVLKDPAPAVVVTGLGESSVDLQLRAWTKTGDYWGVKGD 239

Query: 529 VTKEVKLRFDREGISIPFPQQDVHLH 554
           +TK +  ++ +EGI IPFPQ D+H+H
Sbjct: 240 LTKGIYEKYGKEGIEIPFPQMDIHVH 265