Pairwise Alignments

Query, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

Subject, 351 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis JJ

 Score =  107 bits (266), Expect = 1e-27
 Identities = 58/208 (27%), Positives = 116/208 (55%), Gaps = 10/208 (4%)

Query: 352 VVWVIGILVGLSQIGLNLAPVLTGFGIAGVIIGFALQDTLSNFAAGMMLLIYRPFDVGDF 411
           ++ + G+L+ LS +G N++ +L G GI G+ +  A +DT+ N  AG ++++ RPF +GD+
Sbjct: 143 LILIAGLLLILSNVGYNISALLAGLGIGGLAVALAAKDTIENLIAGFIIIVDRPFKLGDW 202

Query: 412 VHAGGVDGKVSHMSLVNTTIRTFDNQIIIVPNSKIWGDVIKNVTHERIRRVDMVFGIGYS 471
           +  GG +G V  + + +T +R+F + +I VPN+ I    I+N +  R R+V    G+ Y 
Sbjct: 203 IKWGGKEGIVEEVGIRSTRVRSFGDTLITVPNANIVQTEIENFSERRKRQVKATIGLTYD 262

Query: 472 ---DDLLKAEAVLTDIVKSHPAVLKTPEP-NIKVHTLNTSSIDFIVRPWVKT---DDYWD 524
              + + +A+ ++ +++  H  V+   +P  +      + S+D  V  +V+    D + +
Sbjct: 263 TPVEKVKRAKEIIENVLNDHHGVV---DPIRVSFVEFGSFSLDLRVEYFVRDFGFDFFLN 319

Query: 525 VYWDVTKEVKLRFDREGISIPFPQQDVH 552
              ++  ++K  F++E I   FP Q V+
Sbjct: 320 TKDEINIKIKEEFEKENIEFAFPTQTVY 347