Pairwise Alignments

Query, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

Subject, 275 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella sp. ANA-3

 Score =  193 bits (491), Expect = 6e-54
 Identities = 95/250 (38%), Positives = 155/250 (62%), Gaps = 2/250 (0%)

Query: 304 QLFIFLLILLAAKGGAKVTRTVVRSAVNSKNIRISHLMQDFFVSMSGKVVWVIGILVGLS 363
           ++   L+I    K  + V + +VR  +NS+  +I   +  F  +++  VV+V  I+  L 
Sbjct: 21  KILFALIIFFVGKYFSGVAQKLVRKVLNSR--KIDPTVVSFVANLAWAVVFVFTIIATLG 78

Query: 364 QIGLNLAPVLTGFGIAGVIIGFALQDTLSNFAAGMMLLIYRPFDVGDFVHAGGVDGKVSH 423
           QIG+  A ++   G AG+ +G ALQ +LSNFA+G++++++RP  VGD++ A G+ G V  
Sbjct: 79  QIGVQTASLVAVIGAAGLAVGLALQGSLSNFASGVLMVLFRPCRVGDYIEAAGIAGTVDE 138

Query: 424 MSLVNTTIRTFDNQIIIVPNSKIWGDVIKNVTHERIRRVDMVFGIGYSDDLLKAEAVLTD 483
           +++ +T +RT DN++I+ PNS I    I N +    RR+D+V G+ YS D+ + + VLT+
Sbjct: 139 ITIFSTKLRTPDNKVIVAPNSSIMNGTITNYSASENRRIDLVIGVSYSADIAQTKKVLTE 198

Query: 484 IVKSHPAVLKTPEPNIKVHTLNTSSIDFIVRPWVKTDDYWDVYWDVTKEVKLRFDREGIS 543
           I+ ++  VLK P   I +  L  SSI+F+VRPWVKT DYW   + + +++K   D   I 
Sbjct: 199 ILDNNQYVLKEPGYTIGLSELANSSINFVVRPWVKTADYWTARFQILEQIKNALDAANIE 258

Query: 544 IPFPQQDVHL 553
           IPFPQ D+H+
Sbjct: 259 IPFPQMDIHV 268