Pairwise Alignments

Query, 408 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 424 a.a., BamA/TamA family outer membrane protein from Parabacteroides merdae CL09T00C40

 Score =  103 bits (258), Expect = 7e-27
 Identities = 87/357 (24%), Positives = 153/357 (42%), Gaps = 25/357 (7%)

Query: 74  ETVDVSKTIDWGILPGPFVNPEQGLGIGIAAVGLYAPPTWQEGHPFSTVTITSYTSTSGS 133
           +++   K I W +L GP   PE   G+G A +  +           S +      S +G+
Sbjct: 71  DSIRAHKNIWWSVLGGPSYTPEASFGVGGAVLASFRMNKQDTISQRSFLPAGLNLSINGT 130

Query: 134 YGLGLVNRTYLNNDQWRMLIDGWISHAPSDYWGIGAKAAE---QESNKTHYDAKRLQFNP 190
             +      + N +++R+ ++    + PS Y+G G + AE   +  + T +     Q  P
Sbjct: 131 IVVAGAGTFFFNENRFRIYMNYGYRNEPSHYYGKGFEKAENLERGDSTTRFHRSYFQLYP 190

Query: 191 SLAYELFPSTYLKVGWQWQSYRAIA----VKKKGDAAAELKPGVSSGSLIGL-EYDSRDF 245
              +E+ P  YL  G    +Y  ++    V ++     + K    +  + GL +YD+RD 
Sbjct: 191 RFVWEVRPHFYLG-GLFDLNYTKVSDVNPVMEEDPYFQQFKRKYFNVGIGGLIQYDTRDD 249

Query: 246 EPNPQSGSYINLEWSDYRDRYGSDFDYQQWVFNLRHYQRL-TPQTIFAMEWFNQSFTGEV 304
              P  G  +   +  +   +G  ++Y+      R ++ +  P++  A    +Q   G++
Sbjct: 250 VATPTRGMLLGANFKLFGKYWGGAYNYEIIELEYRQFKNVFRPRSTLAWIAKSQIGLGDI 309

Query: 305 PWFDHAMLGDDQRMRGYYQGQYRDKHFATAQFEIRHSFN-----------ARHGMVAWLG 353
           P+ +    G    +RGYY G+YRDK  A    E RH F            A+ G VAW+G
Sbjct: 310 PFTELPTFGSPFDLRGYYMGKYRDKSMAYGIVEYRHMFGSPAKYKSGNFWAKCGFVAWVG 369

Query: 354 SGSTASQFADLAESEWLPTLGIGYRFAFKARINVRIDLG--VGKQNNGFYFQINEAF 408
           +G+      D   ++W    G G RF  +   N R+D+G   G+     Y  + EAF
Sbjct: 370 TGTIGETPFDW--NKWKLNFGAGLRFQMQPGKNFRLDVGKEPGQPGMQVYMNMTEAF 424