Pairwise Alignments

Query, 408 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  102 bits (254), Expect = 2e-26
 Identities = 96/356 (26%), Positives = 145/356 (40%), Gaps = 30/356 (8%)

Query: 80  KTIDWGILPGPFVNPEQGLGIGIAAVGLYAPPTWQEGHPFSTVTITSYTSTSGSYGLGLV 139
           + + + IL GP   P+ GL IG +A+  +           S V +       G   L   
Sbjct: 57  RNLHYNILGGPSYTPDFGLLIGGSALMTFRMNPSDTTQQRSVVPMAIALMFEGGLNLFTK 116

Query: 140 NRTYLNNDQWRMLIDGWISHAPSDYWGIGA---KAAEQESNKTHYDAKRLQFNPSLAYEL 196
            + +   D++R+       +   +++GIG    K   +  + + Y    +Q NP   + L
Sbjct: 117 PQLFFKGDRFRIFGVFAYKNTLENFYGIGYSTNKDYPRGEDTSEYRYSGVQVNPWFLFRL 176

Query: 197 FPSTYLKVGWQWQSYRAIAVKKKGD-------AAAELKPG---VSSGSLIGLEYDSRDFE 246
             S +        +Y  I     G        AA     G   +SSG    L YD+RD  
Sbjct: 177 GKSNFFAGPQIDFNYDKITKPAAGMIEQPSYIAAGGTDHGYSNLSSGLGFLLTYDTRDVP 236

Query: 247 PNPQSGSYINLEWSDYRDRYGSDFDYQQWVFNLRHYQRLTPQTIFAMEWFNQSFTGEVPW 306
            N   G+Y++     Y   +GSD ++ +   + R Y+ L  + + A     ++  G VP 
Sbjct: 237 ANAYRGTYLDFRGMMYNKAFGSDNNFYRLEIDYRQYKTLGKRKVLAWTVQTKNVFGNVPL 296

Query: 307 FDHAMLGDDQRMRGYYQGQYRDKHFATAQFEIRHSFNA-----------RHGMVAWLGSG 355
             +A+ G    +RGYY GQ+RDK       E R   N              G VAW G G
Sbjct: 297 TKYALSGTPFDLRGYYMGQFRDKSSHVMMAEYRQMINTDKSNWVKKMLNHVGYVAWGGCG 356

Query: 356 STASQFADLAESEWLPTLGIGYRFAFKARINVRIDLG---VGKQNNGFYFQINEAF 408
                   +     LP LG+G R   + R+NVR+D G   V KQN  FYF + EAF
Sbjct: 357 FMGPTPGKI--EGVLPNLGLGLRIEVQPRMNVRLDFGRDMVNKQNL-FYFNMTEAF 409