Pairwise Alignments

Query, 488 a.a., NAD-dependent succinate-semialdehyde dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., succinate-semialdehyde dehydrogenase (NADP+) [EC: 1.2.1.16] (from data) from Shewanella oneidensis MR-1

 Score =  563 bits (1451), Expect = e-165
 Identities = 286/480 (59%), Positives = 353/480 (73%), Gaps = 1/480 (0%)

Query: 6   MLPTDFPFFHQSAFINGQWILGEPQARQTVTNPFDGSLIGSVPLLSAAQVQEAIAGAQAA 65
           ML  D     Q  +INGQW     +    +TNP  G++I  VP++  A+ Q AIA A+AA
Sbjct: 1   MLLNDPSLLRQQCYINGQWCDANSKETVAITNPATGAVIACVPVMGQAETQAAIAAAEAA 60

Query: 66  QILWCQQPAENKAKILRRWYELIEQHHESLAKLLTIEQGKPLAEARGEIHYAASFVEWYA 125
              W    A+ +   LRRW+EL+ ++ + LA L+T EQGKPL EA+GE+ YAASF+EW+A
Sbjct: 61  LPAWRALTAKERGAKLRRWFELLNENSDDLALLMTSEQGKPLTEAKGEVTYAASFIEWFA 120

Query: 126 EEAKRAYGELIPSHKPDARIMVSRQPVGVVAAITPWNFPAAMITRKCAPAFAAGCAVVLK 185
           EEAKR YG+ IP H+ D RIMV +QPVGV AAITPWNFPAAMITRK APA AAGC +V+K
Sbjct: 121 EEAKRIYGDTIPGHQGDKRIMVIKQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMVVK 180

Query: 186 PAPDTPFTALALADLAQQAGIPDGLLQVVTGDAIEIGRVLTESKTVRKLSFTGSTGVGKL 245
           PAP TPFTALALA LA++AGIP G+  V+TGDAI IG  +  +  VRKLSFTGST VG  
Sbjct: 181 PAPQTPFTALALAVLAERAGIPAGVFSVITGDAIAIGNEMCTNPIVRKLSFTGSTNVGIK 240

Query: 246 LMAQSANNVKKLSLELGGNAPFIVFEDADINAAIDGVMVAKFRNAGQTCVCANRIYVHDA 305
           LMAQ A  +KKLSLELGGNAPFIVF+DA+I+AA++G M+AK+RNAGQTCVCANRIYV   
Sbjct: 241 LMAQCAPTLKKLSLELGGNAPFIVFDDANIDAAVEGAMIAKYRNAGQTCVCANRIYVQAG 300

Query: 306 VYDQFAAKLVDRVSRLNVGYGLDAGVNIGPLINDAAVAKVTSHIVDAQSKGAKVMFGA-L 364
           VYD+FA KL   V++L VG G+ AGV  GPLIN AAV KV SH+ DA  KGA V+ G  +
Sbjct: 301 VYDEFAEKLSMAVAKLKVGEGIIAGVTTGPLINAAAVEKVQSHLEDAIKKGATVLAGGKV 360

Query: 365 PEAGSRLFQPHVLTEVTDEMRVADEETFGPLAALFRFSSEQEVIERANATDSGLAAYCYT 424
            E G   F+P VLT     MRVA EETFGPLA LF+F+   +VI++AN T+ GLAAY Y 
Sbjct: 361 HELGGNFFEPTVLTNADKSMRVAREETFGPLAPLFKFNDVDDVIKQANDTEFGLAAYFYG 420

Query: 425 QSLRRAWHMSEALEAGIVGINEGLISTTLAPFGGIKESGLGREGAKHGLEEYLEVKYTLM 484
           + +   W ++E+LE G+VG+N GLIST +APFGG+K SGLGREG+K+G+EEYLE+KY  M
Sbjct: 421 RDISLVWKVAESLEYGMVGVNTGLISTEVAPFGGMKSSGLGREGSKYGIEEYLEIKYICM 480