Pairwise Alignments

Query, 303 a.a., 1-aminocyclopropane-1-carboxylate deaminase from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  274 bits (700), Expect = 2e-78
 Identities = 146/316 (46%), Positives = 202/316 (63%), Gaps = 16/316 (5%)

Query: 2   LITQSPITEHRFAGQTFYLKRDDKLHPHFSGNKARKLMALLEGDFPGITTLISYGSAQAN 61
           ++  SP+    FAG+  +LKRDD LHP FSGNKARK    L+ +F G+T LI +GSAQAN
Sbjct: 1   MLANSPVESFSFAGREIFLKRDDLLHPGFSGNKARKFAYFLDQEFAGVTKLIGHGSAQAN 60

Query: 62  SLYSFAALAKLRGWRLEFYVDHIPAWLKSYPIGNYRGALELGATIIETRSLGAKHP---- 117
           SLYS +ALAKL+GW+ +FYVDHI + + + P GNY  A+  G  +I+  SL A +P    
Sbjct: 61  SLYSLSALAKLKGWQCDFYVDHIASHVLTLPTGNYAAAIANGTRVIDLSSLIAANPFVQR 120

Query: 118 ------REFIQQQRMP-NTDCLVIEEGARSPFAEPGIKQLALEMLEWLRHQTQPDWVVAL 170
                  E+I QQ +P   + L I EG R  +AE G+ QLA E+  W   Q   D  V L
Sbjct: 121 ELKWTCHEYIVQQVLPAEPNALFIPEGGRCQYAEYGVNQLAAEIETWAMQQGMTDLKVFL 180

Query: 171 PSGTGTTALYLHKYL--QPHGVEVITCPCVGDESYLREQFLMLGETS--HPTVLTSTTKH 226
           P+GTGTTAL+L++Y   Q   + V+TC  VG ++YLR+QF ML   S  HP +L +  K+
Sbjct: 181 PAGTGTTALFLNQYFVRQQSDIRVLTCAVVGGDAYLRQQFSMLNPNSAEHPQILNADKKY 240

Query: 227 YFGHLYPEDYQIWQALLAQTHIEFDLLYDPLMWRLLSAWRTENPDRNLLYLHQGGLLGNE 286
           +FG LYPE Y +W  + A + ++F+LLYDPL + +L  +  +     ++Y+HQGGLLGNE
Sbjct: 241 HFGKLYPEFYAMWLRICA-SGVQFELLYDPLGFIVLEKYLPQWDASPVMYIHQGGLLGNE 299

Query: 287 SMLPRYQRQFSEYTLA 302
           +MLPRY R+F + + A
Sbjct: 300 TMLPRYLRKFGQSSSA 315