Pairwise Alignments

Query, 760 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) from Pseudomonas fluorescens FW300-N2E2

 Score = 88.6 bits (218), Expect = 5e-22
 Identities = 105/406 (25%), Positives = 184/406 (45%), Gaps = 51/406 (12%)

Query: 61  LSAEEQS--------FIDNELETLLAMLDDYKIVKQDRDLPKEVWDYLRKERFFSLIISK 112
           L+ EEQ+        F +  L+   A  D      ++   P+E  D + +  FF +++ +
Sbjct: 2   LATEEQTQIRDMARQFAEERLKPFAAEWD------REHRFPREAIDEMAELGFFGMLVPE 55

Query: 113 EYGGREFSALANSTIVSRIATRSISTAVTVMVPNSLGPGELLSHYGTQEQKDYWLPRLAD 172
           ++GG +   LA +  +  IA    + +  + V NS+G   +L  +G  EQK  +L  LA 
Sbjct: 56  QWGGCDTGYLAYAMTLEEIAAGDGACSTIMSVHNSVGCVPILK-FGNDEQKAKFLTPLAS 114

Query: 173 GTDIPCFALTGPEAGSDAGSIPDQGVVCYGKHEGKDVLGIRLSWNKRYITLAPVATVLGL 232
           G  +  FALT P+AGSDA S+  +      + EG   +   L+  K++IT    A V+ +
Sbjct: 115 GAMLGAFALTEPQAGSDASSLKTR-----ARLEGDHYV---LNGCKQFITSGQNAGVV-I 165

Query: 233 AFKLSDPEHLLGDKEEIGITCALIPASHEGVEIGERHDPLGL-AFMNGPTRGQDVFIPMD 291
            F ++DP        + GI+  ++P    G  +    D LG  A        +D+ +P+ 
Sbjct: 166 VFAVTDP-----SAGKRGISAFIVPTDSPGYSVARVEDKLGQHASDTCQILFEDLKVPVG 220

Query: 292 WLIGGADYAGKGWRMLVECLSAGR-GISLPALGTAIGHLTARTTGAYGYVRKQFGMSIGK 350
             +G     G+G+++ +  L  GR GI+  A+G A     A     Y   R  FG  I +
Sbjct: 221 NRLG---EEGEGYKIALANLEGGRVGIAAQAVGMARAAFEAARD--YARERSSFGKPIIE 275

Query: 351 FEGVAEAMGRIGGLTYLLEATRTLTTTSLDLKE--KPGIVTA-IAKYHMTEIARTILNDA 407
            + VA    R+  +   +   R +   +  L++  +P +V A +AK   +E+A  + + A
Sbjct: 276 HQAVA---FRLADMATQIAVARQMVHYAAALRDSGQPALVEASMAKLFASEMAEKVCSMA 332

Query: 408 MDIHSGRA-IQDGPMNYLATHYLGVPVAITVEGAN-----ILTRNL 447
           +    G   + D P+  +   Y  V V    EG +     +++RNL
Sbjct: 333 LQTLGGYGYLNDFPLERI---YRDVRVCQIYEGTSDIQRMVISRNL 375