Pairwise Alignments

Query, 760 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) from Pseudomonas stutzeri RCH2

 Score = 86.3 bits (212), Expect = 3e-21
 Identities = 95/354 (26%), Positives = 167/354 (47%), Gaps = 37/354 (10%)

Query: 105 FFSLIISKEYGGREFSALANSTIVSRIATRSISTAVTVMVPNSLGPGELLSHYGTQEQKD 164
           FF +++ +++GG +   LA +  +  IA    + +  + V NS+G   +L  +G ++QK 
Sbjct: 48  FFGMLVPEQWGGSDTGYLAYAMALEEIAAGDGACSTIMSVHNSVGCVPIL-RFGNEQQKS 106

Query: 165 YWLPRLADGTDIPCFALTGPEAGSDAGSIPDQGVVCYGKHEGKDVLGIRLSWNKRYITLA 224
            +L  LA G  I  FALT P+AGSDA S+  +      + +G   +   L+  K++IT  
Sbjct: 107 DFLTPLARGEQIGAFALTEPQAGSDASSLRTR-----ARRDGDHYV---LNGAKQFITSG 158

Query: 225 PVATVLGLAFKLSDPEHLLGDKEEIGITCALIPASHEGVEIGERHDPLGL-AFMNGPTRG 283
             A  + + F ++DP     D  + GI+  ++P    G ++    D LG  A        
Sbjct: 159 KHAGTV-IVFAVTDP-----DAGKGGISAFIVPTDSPGYQVVRVEDKLGQHASDTCQIAF 212

Query: 284 QDVFIPMDWLIGGADYAGKGWRMLVECLSAGR-GISLPALGTAIGHLTARTTGAYGYVRK 342
           +D+ +P+   +G     G+G+R+ +  L  GR GI+  A+G A     A     Y   R+
Sbjct: 213 EDLRVPVANRLG---EEGEGYRIALANLEGGRIGIAAQAVGMARAAFEAARD--YARDRE 267

Query: 343 QFGMSIGKFEGVAEAMGRIGGLTYLLEATRTLTTTSLDLKE--KPGIVTA-IAKYHMTEI 399
            FG  I + + VA    R+  +   +   R +   +  L+E  +P +V A +AK   +E+
Sbjct: 268 TFGKPIIEHQAVA---FRLADMATQIAVARQMVHHAAALREVGRPALVEASMAKLFASEM 324

Query: 400 ARTILNDAMDIHSGRA-IQDGPMNYLATHYLGVPVAITVEGAN-----ILTRNL 447
           A  + + A+    G   + D P+  +   Y  V V    EG +     +++RNL
Sbjct: 325 AEKVCSAAIQTLGGYGYLADFPVERI---YRDVRVCQIYEGTSDIQRLVISRNL 375