Pairwise Alignments

Query, 760 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 815 a.a., acyl-CoA dehydrogenase (RefSeq) from Shewanella amazonensis SB2B

 Score =  736 bits (1901), Expect = 0.0
 Identities = 376/739 (50%), Positives = 504/739 (68%), Gaps = 3/739 (0%)

Query: 1   MSSLRRKWISDPAFKMFKKVLPPLSQTEKEAMEAGSVWWDGELFSGKPDFTKLHHYPKPT 60
           +SS+R+  I+ P  K+++ ++P +S TEKEA++AG+ WW+ +LF+G P++ KLH+YP   
Sbjct: 61  ISSIRQSLITRPLLKVYRGIMPEMSSTEKEAIDAGTTWWEADLFAGNPNWKKLHNYPTAR 120

Query: 61  LSAEEQSFIDNELETLLAMLDDYKIVKQDRDLPKEVWDYLRKERFFSLIISKEYGGREFS 120
           LSAEEQ+FID  +  +  M++++++  Q  DLP +VW YL+   FF++II K+YGG EFS
Sbjct: 121 LSAEEQAFIDGPVNEVCRMVNEHQVSHQFADLPADVWQYLKDNGFFAMIIKKKYGGLEFS 180

Query: 121 ALANSTIVSRIATRSISTAVTVMVPNSLGPGELLSHYGTQEQKDYWLPRLADGTDIPCFA 180
           A A S ++ ++A  S   A TV VPNSLGPGELL HYGT EQ+D++LPRLA G ++PCFA
Sbjct: 181 AYAQSRVLQKLAGVSSELASTVGVPNSLGPGELLQHYGTAEQQDHYLPRLAKGLEVPCFA 240

Query: 181 LTGPEAGSDAGSIPDQGVVCYGKHEGKDVLGIRLSWNKRYITLAPVATVLGLAFKLSDPE 240
           LT PEAGSDAGSIPD GVVC G  +G++VLG++L+WNKRYITLAP+ATVLGLAFKL DPE
Sbjct: 241 LTSPEAGSDAGSIPDYGVVCKGMWKGEEVLGMKLTWNKRYITLAPIATVLGLAFKLRDPE 300

Query: 241 HLLGDKEEIGITCALIPASHEGVEIGERHDPLGLAFMNGPTRGQDVFIPMDWLIGGADYA 300
            LLG +EE+GITCALIP   EGVE G RH PL   F NGPTRG+DVF+P+ ++IGG   A
Sbjct: 301 RLLGGEEELGITCALIPTDVEGVETGRRHFPLNCMFQNGPTRGKDVFVPLSFIIGGPKMA 360

Query: 301 GKGWRMLVECLSAGRGISLPALGTAIGHLTARTTGAYGYVRKQFGMSIGKFEGVAEAMGR 360
           G+GWRMLVECLS GRGI+LP+         A  TGAY  +R+QF + IGK EG+ E M R
Sbjct: 361 GQGWRMLVECLSVGRGITLPSNSAGGVKTAALATGAYARIRRQFKLPIGKLEGIEEPMAR 420

Query: 361 IGGLTYLLEATRTLTTTSLDLKEKPGIVTAIAKYHMTEIARTILNDAMDIHSGRAIQDGP 420
           IGG  YL++A  +LTTT +DL EKP +++AI KYH+T+  +  + DAMDIH G+ +  GP
Sbjct: 421 IGGNAYLMDAVTSLTTTGIDLGEKPSVISAIVKYHLTDRMQKCVIDAMDIHGGKGVCLGP 480

Query: 421 MNYLATHYLGVPVAITVEGANILTRNLMIFGQGATRCHPYVLKEMEAAANPDQQEGAKAF 480
            NYL   Y   P+AITVEGANILTR+++I+GQGA RCHPYVL EM++A + D ++G   F
Sbjct: 481 NNYLGRGYQAAPIAITVEGANILTRSMIIYGQGAIRCHPYVLAEMDSAFDKDVRQGLNKF 540

Query: 481 DELLFKHIAHATKNSFGALFAALTGSRFIKANMSGPTQDYYKQMTRLSRALAVSADVAML 540
           D  LF HI     N   +++  LTGSRF  A     T+ YY+ M R S  LA+ +D+AM 
Sbjct: 541 DAALFGHIGFTISNLIRSVWMGLTGSRFSNAPYGDKTKRYYQHMNRFSANLALLSDLAMA 600

Query: 541 TLGGELKRKEMISARLGDALSYLYMGSAVLKKYEDEGRHQADLDYVHYAMQYCLHHAAKS 600
           TLGG LKRKE ISARLGD LS LY+ SA LK+Y+DEGR   DL  V +A++  L     S
Sbjct: 601 TLGGNLKRKERISARLGDMLSQLYLASATLKRYQDEGRQTEDLPLVQWAVEDALFKLQAS 660

Query: 601 LNQAYRNYPVTGVGAILKGLLFPLGNHFAPPSDELAVKLAESLMTPGAHRDRLTALCYIG 660
           L++   N+P  G+G +L+ LL P G     PSD L  K+A+ + TP A R+RL    +  
Sbjct: 661 LDELLDNFP-AGLGGVLRVLLLPFGRPLKRPSDVLDHKVAKIMQTPCASRERLGQGQFWE 719

Query: 661 KGEDDSVGLMEKAFLAMYSVKGLERKLQQGVKEGKVARKGLLVDRLAQAEQAGVLSADEV 720
             +++ VG+ E+ F  + + + L  K+ +    GK      L    A+ +  G+LS  E+
Sbjct: 720 ACDNNPVGVQEQTFKDILAAEPLYDKVCKAA--GKRLPFMWLDQVAAEGKALGILSDAEI 777

Query: 721 ASILAAEKLRSRAIQVDHF 739
           A +  AE  R ++I VD F
Sbjct: 778 ALLEKAEIGRMKSINVDDF 796