Pairwise Alignments

Query, 760 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 744 a.a., acyl-CoA dehydrogenase (RefSeq) from Shewanella loihica PV-4

 Score =  671 bits (1731), Expect = 0.0
 Identities = 354/733 (48%), Positives = 481/733 (65%), Gaps = 7/733 (0%)

Query: 17  FKKVLPPLSQTEKEAMEAGSVWWDGELFSGKPDFTKLHHYPKPTLSAEEQSFIDNELETL 76
           FKKVLP +S TE+EA++AG VW +G ++ G PDF  L   P  TLS EEQ+F+D  ++TL
Sbjct: 7   FKKVLPSISTTEQEALDAGDVWLEGSIYQGIPDFDALRQVPGATLSDEEQAFLDGPVQTL 66

Query: 77  LAMLDDYKIVKQDRDLPKEVWDYLRKERFFSLIISKEYGGREFSALANSTIVSRIATRSI 136
           + M+DD+ I +    LP  + ++L++ +FFSLII K +GG EFS  ANSTIV+ IA +S 
Sbjct: 67  IEMVDDFAI-QNSLHLPDNILNFLKEHKFFSLIIPKAFGGLEFSPYANSTIVATIAAKSS 125

Query: 137 STAVTVMVPNSLGPGELLSHYGTQEQKDYWLPRLADGTDIPCFALTGPEAGSDAGSIPDQ 196
           + AVTVMVPNSLGPGELL HYGTQ Q+D+WLPRLA+G +IPCFALT PEAGSDAG IPD 
Sbjct: 126 AVAVTVMVPNSLGPGELLMHYGTQAQQDFWLPRLANGQEIPCFALTSPEAGSDAGGIPDI 185

Query: 197 GVVCYGKHEGKDVLGIRLSWNKRYITLAPVATVLGLAFKLSDPEHLLGDKEEIGITCALI 256
           G V  G+++G+ VLG+ ++W+KRYITLAP+ATVLGLAFK+ DP+ LLG KE++GITCALI
Sbjct: 186 GTVTMGEYQGEQVLGLSVTWDKRYITLAPIATVLGLAFKVEDPQGLLGGKEQLGITCALI 245

Query: 257 PASHEGVEIGERHDPLGLAFMNGPTRGQDVFIPMDWLIGGADYAGKGWRMLVECLSAGRG 316
           P SH GVE+G RHDP+G  F NG TRG++VFIPMD++IGG    G+GW+MLV CL AGRG
Sbjct: 246 PKSHPGVELGNRHDPMGCRFYNGTTRGENVFIPMDFIIGGQQNIGRGWQMLVACLGAGRG 305

Query: 317 ISLPALGTAIGHLTARTTGAYGYVRKQFGMSIGKFEGVAEAMGRIGGLTYLLEATRTLTT 376
           ISLPALG ++   + +++  Y  VR+QFG++IGKFEG+ E +  I G TYL EA R LTT
Sbjct: 306 ISLPALGVSVSQASFKSSAEYAAVREQFGLAIGKFEGIQEKLADIAGKTYLQEAMRVLTT 365

Query: 377 TSLDLKEKPGIVTAIAKYHMTEIARTILNDAMDIHSGRAIQDGPMNYLATHYLGVPVAIT 436
             L L  KP +VTA+AKYHMTEI R +LN AMDI +G+AIQ GP N LA+ Y+  P+AIT
Sbjct: 366 EGLGLGLKPSVVTAMAKYHMTEIGRDVLNSAMDIQAGKAIQRGPQNTLASGYVAQPIAIT 425

Query: 437 VEGANILTRNLMIFGQGATRCHPYVLKEMEAAANPDQQEGAKAFDELLFKHIAHATKNSF 496
           VEGANILTRNLMIFGQG  RCHP+ L+ M  A + D ++  K F+ +  + + ++  NS 
Sbjct: 426 VEGANILTRNLMIFGQGVMRCHPH-LQSMVEAIHSDDKDADKTFNRIFKQTVGYSVGNSL 484

Query: 497 GALFAALTGSRFIKANMSGPTQDYYKQMTRLSRALAVSADVAMLTLGGELKRKEMISARL 556
            A    L        +      +Y K + +L+  LAV AD ++L LGG+LK+ EM+SARL
Sbjct: 485 RAFRLGLLPFTADAKSELSEVVEYEKAVHKLASKLAVYADFSLLVLGGKLKQAEMLSARL 544

Query: 557 GDALSYLYMGSAVLKKYEDE--GRHQADL-DYVHYAMQYCLHHAAKSLNQAYRNYPVTGV 613
           GD +SYLY   A ++ YE +    H+A    Y  YA ++ L +A  +L     N+P    
Sbjct: 545 GDVMSYLYAAMASIRYYEQKVSSEHRAQAKPYFEYATRWALVNAENALLSFLDNFPSAAT 604

Query: 614 GAILKGLLFPLGNHFAPPSDELAVKLAESLMTPGAHRDRLTALCYIGKGEDDSVGLMEKA 673
             ++K +           +D+L  +LA         + +LT L     G+ + +   ++A
Sbjct: 605 RQLMKLITVTYSPKMKKINDDLIRELAHEAQLNTQIKRQLTHLVKPVPGDGNDIN--QQA 662

Query: 674 FLAMYSVKGLERKLQQGVKEGKVARKGLLVDRLAQAEQAGVLSADEVASILAAEKLRSRA 733
           +LA  +   L  K+++G+K+G           L +A +A +++  E   +L     R RA
Sbjct: 663 YLAKIACLPLLAKVKKGLKQGYFKSGVRFAQTLDRAREAKIITEGEHKQLLDYNLKRERA 722

Query: 734 IQVDHFSHDFSQI 746
           I+VD F  D   I
Sbjct: 723 IRVDEFDFDMQLI 735